RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 BPHLQ86WA6 291 aaPredicted RBP13.46□□□□□ -0.25
RNF4-208ENST00000507247 TMEM126BQ8IUX1 230 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 SHISA5Q8N114 240 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 SRFBP1Q8NEF9 429 aaKnown RBP13.46□□□□□ -0.25
RNF4-208ENST00000507247 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.25
RNF4-208ENST00000507247 METTL2AQ96IZ6 378 aaKnown RBP13.46□□□□□ -0.25
RNF4-208ENST00000507247 RILPQ96NA2 401 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 TBCDQ9BTW9 1192 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 SIRT5Q9NXA8 310 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 AHSPQ9NZD4 102 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 DHCR7Q9UBM7 475 aaKnown RBP13.46□□□□□ -0.25
RNF4-208ENST00000507247 PISDQ9UG56 409 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
RNF4-208ENST00000507247 SCN2AQ99250 2005 aa13.46□□□□□ -0.26
RNF4-208ENST00000507247 A0A0A6YYC8 382 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 A0A0A6YYD5 115 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 ZNF860A6NHJ4 632 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 I3L1I5 382 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 TMPRSS11DO60235 418 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 PCDH7O60245 1069 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 GALR3O60755 368 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 SCRG1O75711 98 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 SCELO95171 688 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 JMJD7P0C870 316 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 ZNF28P17035 718 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 SDC1P18827 310 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 ITGAXP20702 1163 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 HIST1H1TP22492 207 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 TACR1P25103 407 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 DIO3P55073 304 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 TGM3Q08188 693 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 FAM53BQ14153 422 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 HERC3Q15034 1050 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNF4-208ENST00000507247 YOD1Q5VVQ6 348 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 IL23RQ5VWK5 629 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 NOXRED1Q6NXP6 359 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 GALNT18Q6P9A2 607 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 CYB5D1Q6P9G0 228 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 TTLL10Q6ZVT0 673 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 NUDT13Q86X67 352 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 GALNT15Q8N3T1 639 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 METTL27Q8N6F8 245 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 ACOT4Q8N9L9 421 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 SLC38A9Q8NBW4 561 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 OR9A4Q8NGU2 314 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 BCAS4Q8TDM0 211 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 CATSPER2Q96P56 530 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 DDX31Q9H8H2 851 aaKnown RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 ACTR5Q9H9F9 607 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 ANKHQ9HCJ1 492 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 MCM8Q9UJA3 840 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 G3BP2Q9UN86 482 aaKnown RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 TMED5Q9Y3A6 229 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 NAALAD2Q9Y3Q0 740 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 TMEM184BQ9Y519 407 aaPredicted RBP13.45□□□□□ -0.26
RNF4-208ENST00000507247 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 B3GALT1Q9Y5Z6 326 aa13.45□□□□□ -0.26
RNF4-208ENST00000507247 SGK494L7N484 410 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 DSCR3O14972 297 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 RDH16O75452 317 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 NSA2O95478 260 aaKnown RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 NTRK1P04629 796 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 BCKDHAP12694 445 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 TSFMP43897 325 aaKnown RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 ARSFP54793 590 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 MTTPP55157 894 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 OLR1P78380 273 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 RUNX2Q13950 521 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 CCNYL2Q5T2Q4 361 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 MRM1Q6IN84 353 aaKnown RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 RHBDD2Q6NTF9 364 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 PAGE2Q7Z2X7 111 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 SPATA19Q7Z5L4 167 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 ZCCHC7Q8N3Z6 543 aaKnown RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 LIX1Q8N485 282 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 OR5T3Q8NGG3 340 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 SLC45A3Q96JT2 553 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 TAAR9Q96RI9 348 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 SERINC2Q96SA4 455 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 COPS7BQ9H9Q2 264 aaPredicted RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 AIG1Q9NVV5 245 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 ASIC5Q9NY37 505 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 NOP53Q9NZM5 478 aaKnown RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 NDOR1Q9UHB4 597 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 CNOT1A5YKK6 2376 aaKnown RBP13.44□□□□□ -0.26
RNF4-208ENST00000507247 SPEGQ15772 3267 aa13.44□□□□□ -0.26
RNF4-208ENST00000507247 A0A1B0GX78 115 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 C9orf172C9J069 976 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 NDUFAB1O14561 156 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 UBDO15205 165 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 MYO1DO94832 1006 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 ANXA4P09525 319 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms