RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 AP2A1O95782 977 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TGM6O95932 706 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 AVPP01185 164 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ANXA5P08758 320 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CSF3P09919 207 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 POU2F1P14859 743 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SLC9A1P19634 815 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 NFKB1P19838 968 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 MSH3P20585 1137 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 GPD1P21695 349 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 EPHA1P21709 976 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CES1P23141 567 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 GMPRP36959 345 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 USP8P40818 1118 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 BCL6P41182 706 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 KIR2DL2P43627 348 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 MTIF2P46199 727 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF143P52747 638 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 PNLIPRP1P54315 467 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 DVL1P1P54792 670 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 DIO3P55073 304 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CDH15P55291 814 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 OR4D2P58180 307 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 RPL7AP62424 266 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TPM4P67936 248 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 IL13RA1P78552 427 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ACTN3Q08043 901 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 PCDH1Q08174 1060 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ITKQ08881 620 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 PTPRCAPQ14761 206 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 NOMO1Q15155 1222 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 GUSBP1Q15486 140 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FAM189A2Q15884 450 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 PPP2R5EQ16537 467 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 STX1AQ16623 288 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 NCMAPQ5T1S8 102 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CASC10Q5T4H9 136 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CCDC183Q5T5S1 534 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FNDC7Q5VTL7 733 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SCYL2Q6P3W7 929 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 RTL4Q6ZR62 310 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CLEC17AQ6ZS10 378 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FAM47EQ6ZV65 393 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 NOP9Q86U38 636 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CREBRFQ8IUR6 639 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TRIM59Q8IWR1 403 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 PM20D2Q8IYS1 436 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 BBS5Q8N3I7 341 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ATPAF2Q8N5M1 289 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CSNK1A1LQ8N752 337 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CNTD1Q8N815 330 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 OR2L3Q8NG85 312 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 OR2A1Q8NGT9 310 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 OR2L8Q8NGY9 312 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 LRRN4Q8WUT4 740 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SYN2Q92777 582 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 WNT2BQ93097 391 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FATE1Q969F0 183 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 C3orf49Q96BT1 292 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CTHRC1Q96CG8 243 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 LRRC58Q96CX6 371 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 DHTKD1Q96HY7 919 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FAM81BQ96LP2 452 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CSPG4P5Q96PW8 444 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FAM111AQ96PZ2 611 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TM9SF2Q99805 663 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SLC6A7Q99884 636 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SYT3Q9BQG1 590 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FICDQ9BVA6 458 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 RBCK1Q9BYM8 510 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 DEFB126Q9BYW3 111 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 GPR63Q9BZJ6 419 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 NAT10Q9H0A0 1025 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CDC42EP4Q9H3Q1 356 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 DHX35Q9H5Z1 703 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ARNT2Q9HBZ2 717 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ZFP64Q9NPA5 681 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 INTS7Q9NVH2 962 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 RBM22Q9NW64 420 aaKnown RBP eCLIP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 AURKAIP1Q9NWT8 199 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 HPF1Q9NWY4 346 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 HEY2Q9UBP5 337 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CIDEBQ9UHD4 219 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 POLG2Q9UHN1 485 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 DMGDHQ9UI17 866 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 USP22Q9UPT9 525 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ERVK-11Q9UQG0 969 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CAMK2AQ9UQM7 478 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 ASF1AQ9Y294 204 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TDRKHQ9Y2W6 561 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SLC6A5Q9Y345 797 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 RNF115Q9Y4L5 304 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 MMP24Q9Y5R2 645 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TET2Q6N021 2002 aaPredicted RBP3□□□□□ -1.93
TCOF1-208ENST00000506063 GLYATL1P3A0A0U1RQE8 302 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 TCRBV16S1A1N1A0A5B0 115 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 LRRD1A4D1F6 860 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SLC22A31A6NKX4 558 aa3□□□□□ -1.93
TCOF1-208ENST00000506063 SIGLEC16A6NMB1 481 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms