RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PDSS2Q86YH6 399 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 PGAM4Q8N0Y7 254 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 ZCCHC7Q8N3Z6 543 aaKnown RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 GLB1L3Q8NCI6 653 aaPredicted RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 OR7A2PQ8NGA2 310 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 SLC13A3Q8WWT9 602 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GTF2H4Q92759 462 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 UCN3Q969E3 161 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GFM2Q969S9 779 aaKnown RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GAL3ST3Q96A11 431 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 COQ8BQ96D53 544 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 C10orf90Q96M02 699 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 TGM7Q96PF1 710 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 C17orf62Q9BQA9 187 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 SLC39A3Q9BRY0 314 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 DPY30Q9C005 99 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 REXO4Q9GZR2 422 aaKnown RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 EPB41L1Q9H4G0 881 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 PDP2Q9P2J9 529 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GMPR2Q9P2T1 348 aaKnown RBP9.88□□□□□ -0.83
TPM3-217ENST00000504663 ABCD2Q9UBJ2 740 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 GMEB2Q9UKD1 530 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 ASB4Q9Y574 426 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 PCDHGB2Q9Y5G2 931 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 SPEGQ15772 3267 aa9.88□□□□□ -0.83
TPM3-217ENST00000504663 DYTNA2CJ06 578 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ANKRD33BA6NCL7 494 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CFAP73A6NFT4 308 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 GABRR3A8MPY1 467 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 A8MUI8 341 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ERI3O43414 337 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 AKAP10O43572 662 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 DUX1O43812 170 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 PGRP06401 933 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 IL3P08700 152 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ZNF888P0CJ79 500 aaPredicted RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 ALPPL2P10696 532 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 LAMP1P11279 417 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 PRPS1L1P21108 318 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CDH3P22223 829 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 HIST1H1TP22492 207 aaPredicted RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 TGM1P22735 817 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ATP5A1P25705 553 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 CERS1P27544 350 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ALDH4A1P30038 563 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CDKN2CP42773 168 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 RAP1GDS1P52306 607 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CLNS1AP54105 237 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 KCNK10P57789 538 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 KLC1Q07866 573 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 STX5Q13190 355 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CEACAM7Q14002 265 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 SELPLGQ14242 412 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 RPS6KA2Q15349 733 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 SF3A2Q15428 464 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 TRMT5Q32P41 509 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 GTDC1Q4AE62 458 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 DNAL1Q4LDG9 190 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 LRIF1Q5T3J3 769 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 OR4F3Q6IEY1 312 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 WDR74Q6RFH5 385 aaPredicted RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 IKBIPQ70UQ0 350 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 KIAA2013Q8IYS2 634 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CARFQ8N187 725 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 DTWD1Q8N5C7 304 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 Q8N9G6 341 aaPredicted RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 OR8J2Q8NGG1 315 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 OR8K5Q8NH50 307 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 RGMAQ96B86 450 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 MIEF2Q96C03 454 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ZNF764Q96H86 408 aaPredicted RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 SLC41A2Q96JW4 573 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 CCDC3Q9BQI4 270 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 GTPBP2Q9BX10 602 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 PAIP1Q9H074 479 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 EFCAB1Q9HAE3 211 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 PARD6AQ9NPB6 346 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 SLAMF7Q9NQ25 335 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 NMRK1Q9NWW6 199 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 SLC25A37Q9NYZ2 338 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 LEF1Q9UJU2 399 aaPredicted RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 NDUFAF1Q9Y375 327 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 ASCC3Q8N3C0 2202 aaKnown RBP9.87□□□□□ -0.83
TPM3-217ENST00000504663 UNC13CQ8NB66 2214 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 SCN3AQ9NY46 2000 aa9.87□□□□□ -0.83
TPM3-217ENST00000504663 WDR87Q6ZQQ6 2873 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 FITM1A5D6W6 292 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 CCDC154A6NI56 674 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 NTN3O00634 580 aaPredicted RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 NME4O00746 187 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 KHNYNO15037 678 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 GYG2O15488 501 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 CFLARO15519 480 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 PRKRAO75569 313 aaKnown RBP9.86□□□□□ -0.83
TPM3-217ENST00000504663 SERPIND1P05546 499 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 RETP07949 1114 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
TPM3-217ENST00000504663 CD59P13987 128 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms