RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PRRX2Q99811 253 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 DUSP26Q9BV47 211 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 NPLQ9BXD5 320 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-216ENST00000502848 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 LYRM4Q9HD34 91 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 NEUROD4Q9HD90 331 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 LHX9Q9NQ69 397 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 SERHLQ9NQF3 203 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 MIEF1Q9NQG6 463 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 ACSS1Q9NUB1 689 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-216ENST00000502848 UCKL1Q9NWZ5 548 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 LRIT1Q9P2V4 623 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 BAIAP2L1Q9UHR4 511 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 PHF11Q9UIL8 331 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 PADI4Q9UM07 663 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 PCDHA9Q9Y5H5 950 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.64□□□□□ -1.03
NR1I3-216ENST00000502848 PCM1Q15154 2024 aa8.64□□□□□ -1.03
NR1I3-216ENST00000502848 C1orf226A1L170 272 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 EME2A4GXA9 379 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 FITM1A5D6W6 292 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 SYNDIG1LA6NDD5 238 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 RFXANKO14593 260 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 ERI3O43414 337 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 BCAS2O75934 225 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 CFIP05156 583 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 KLK1P06870 262 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 FAM58BPP0C7Q3 252 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 ATP5A1P25705 553 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 HTR1EP28566 365 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 SLC7A2P52569 658 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TAS2R50P59544 299 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 CYP4F2P78329 520 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 SRSF5Q13243 272 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 FAM53BQ14153 422 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TRIM25Q14258 630 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TCEA2Q15560 299 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 NDUFA9Q16795 377 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PRTGQ2VWP7 1150 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 AASDHQ4L235 1098 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 MTX3Q5HYI7 312 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TOR1AIP1Q5JTV8 583 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 C1orf146Q5VVC0 180 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 YOD1Q5VVQ6 348 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 NANOGP8Q6NSW7 305 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 ZFP1Q6P2D0 407 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 SLC15A3Q8IY34 581 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 KIAA2013Q8IYS2 634 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 RNF175Q8N4F7 328 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 DNAJC22Q8N4W6 341 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 KRTCAP2Q8N6L1 136 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 ACOT4Q8N9L9 421 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 OR52E4Q8NGH9 312 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PSMA8Q8TAA3 256 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 STMN2Q93045 179 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TMEM125Q96AQ2 219 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 MVB12AQ96EY5 273 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 AHCYL2Q96HN2 611 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 EGLN2Q96KS0 407 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 ANKRD27Q96NW4 1050 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 GBP5Q96PP8 586 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 NRTNQ99748 197 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 EBPLQ9BY08 206 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PAIP1Q9H074 479 aaKnown RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 RAD21L1Q9H4I0 556 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 DENND2DQ9H6A0 471 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 DCLRE1BQ9H816 532 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 COPS7BQ9H9Q2 264 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 NANOGQ9H9S0 305 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PDE7BQ9NP56 450 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PRDM7Q9NQW5 492 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PDP2Q9P2J9 529 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 ZNF282Q9UDV7 671 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PSME2Q9UL46 239 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 RAB23Q9ULC3 237 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 PLCL2Q9UPR0 1127 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 POMPQ9Y244 141 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 L3MBTL1Q9Y468 752 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 RNF215Q9Y6U7 377 aa8.63□□□□□ -1.03
NR1I3-216ENST00000502848 TRIOO75962 3097 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 GABRR3A8MPY1 467 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 PRR33A8MZF0 331 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 ACOT8O14734 319 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 SDC3O75056 442 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 KLHL18O94889 574 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 SLITRK5O94991 958 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 IL3P08700 152 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 NUDT7P0C024 238 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 CD1EP15812 388 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 ST6GAL1P15907 406 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 ALOX12P18054 663 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 PTPN6P29350 595 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 BUD31P41223 144 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-216ENST00000502848 LSSP48449 732 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 DGKQP52824 942 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 WNT3P56703 355 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 PHC1P78364 1004 aa8.62□□□□□ -1.03
NR1I3-216ENST00000502848 VAC14Q08AM6 782 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms