RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 SLC6A16Q9GZN6 736 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 PELI2Q9HAT8 420 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 ASIC3Q9UHC3 531 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 FBXW2Q9UKT8 454 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 ASB1Q9Y576 335 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 ADGRG4Q8IZF6 3080 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
CNOT4-211ENST00000498534 CLDN4O14493 209 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 FANCGO15287 622 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 PEX1O43933 1283 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 SMIM10L1P0DMW3 83 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 PTGER1P34995 402 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 MEOX1P50221 254 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 STXBP1P61764 594 aaKnown RBP11.24□□□□□ -0.61
CNOT4-211ENST00000498534 TLE4Q04727 773 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 BBS9Q3SYG4 887 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 FAM45BPQ6NSW5 357 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 PAOXQ6QHF9 649 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 MEX3BQ6ZN04 569 aaKnown RBP11.24□□□□□ -0.61
CNOT4-211ENST00000498534 ZNF227Q86WZ6 799 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 PDIK1LQ8N165 341 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 CYP4Z2PQ8N1L4 340 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 ARMC10Q8N2F6 343 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 B3GNT7Q8NFL0 401 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 FAM57AQ8TBR7 257 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 FAM45AQ8TCE6 357 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 SMIM10Q96HG1 83 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 DMRTA2Q96SC8 542 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 SLC22A14Q9Y267 594 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 MMACHCQ9Y4U1 282 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
CNOT4-211ENST00000498534 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 HIVEP1P15822 2718 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 A0A088AWK7 358 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 IGKV3D-11A0A0A0MRZ8 115 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 A0A1B0GTH9 108 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 DNALI1O14645 258 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ADAM10O14672 748 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 CDC40O60508 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ITGA10O75578 1167 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ZFAND5O76080 213 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 MYO1DO94832 1006 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TPOP07202 933 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 GNAZP19086 355 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 SAT1P21673 171 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 HNMTP50135 292 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 BTN3A2P78410 334 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 REEP5Q00765 189 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 HYAL2Q12891 473 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TERF2Q15554 542 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 MSS51Q4VC12 460 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TOR1AIP1Q5JTV8 583 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 CEP128Q6ZU80 1094 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 NCCRP1Q6ZVX7 275 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 FGD2Q7Z6J4 655 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TMPRSS11BQ86T26 416 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 CHERPQ8IWX8 916 aaKnown RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 CA13Q8N1Q1 262 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 NKAPQ8N5F7 415 aaKnown RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ANKRD53Q8N9V6 530 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TTLQ8NG68 377 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 C16orf52Q8NHV5 167 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ASB5Q8WWX0 329 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ANKRD7Q92527 254 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 CFAP36Q96G28 342 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 VMP1Q96GC9 406 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 EGFL8Q99944 293 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 NPLQ9BXD5 320 aaPredicted RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 SPNS1Q9H2V7 528 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 MCCC2Q9HCC0 563 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 TIMMDC1Q9NPL8 285 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 PNO1Q9NRX1 252 aaKnown RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 ERVK-11Q9UQG0 969 aa11.23□□□□□ -0.61
CNOT4-211ENST00000498534 MRPS33Q9Y291 106 aaKnown RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 YARS2Q9Y2Z4 477 aaKnown RBP11.23□□□□□ -0.61
CNOT4-211ENST00000498534 FOXO6A8MYZ6 492 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 HS6ST1O60243 411 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 BANF1O75531 89 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 PDE9AO76083 593 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 C1GALT1C1LP0DN25 315 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 TFEBP19484 476 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 HPDP32754 393 aaPredicted RBP11.22□□□□□ -0.61
CNOT4-211ENST00000498534 RFC3P40938 356 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 SSR4P51571 173 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 PGGT1BP53609 377 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 HSD17B7P56937 341 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 SLC13A2Q13183 592 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 HP1BP3Q5SSJ5 553 aaPredicted RBP11.22□□□□□ -0.61
CNOT4-211ENST00000498534 ARHGAP11AQ6P4F7 1023 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 SBSNQ6UWP8 590 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 CD163Q86VB7 1156 aa11.22□□□□□ -0.61
CNOT4-211ENST00000498534 IGDCC3Q8IVU1 814 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms