RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 STXBP5Q5T5C0 1151 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 TTC19Q6DKK2 380 aaPredicted RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 SLC39A4Q6P5W5 647 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 ZNF449Q6P9G9 518 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 SLC27A1Q6PCB7 646 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 MEX3BQ6ZN04 569 aaKnown RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 CFAP77Q6ZQR2 320 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 CENPUQ71F23 418 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 SMIM5Q71RC9 77 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 CHST9Q7L1S5 443 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 ARCQ7LC44 396 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 WDR49Q8IV35 697 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 THNSL1Q8IYQ7 743 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 C1orf52Q8N6N3 182 aaKnown RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 ANKRD52Q8NB46 1076 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 TMEM35BQ8NCS4 154 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 GSDMBQ8TAX9 411 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 LRRC39Q96DD0 335 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 ELMOD3Q96FG2 381 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 RSRC1Q96IZ7 334 aaKnown RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 ST6GAL2Q96JF0 529 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 FNBP1Q96RU3 617 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 PRMT1Q99873 361 aaKnown RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 NFKBIZQ9BYH8 718 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 PORCNQ9H237 461 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 CENPHQ9H3R5 247 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 PLK3Q9H4B4 646 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 TDRD3Q9H7E2 651 aaKnown RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 SDF2L1Q9HCN8 221 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 XPNPEP1Q9NQW7 623 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 SETD4Q9NVD3 440 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 NINJ2Q9NZG7 142 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 ADAM22Q9P0K1 906 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 PSMC3IPQ9P2W1 217 aaPredicted RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 DNAJB4Q9UDY4 337 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 KIAA1257Q9ULG3 409 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 FAF1Q9UNN5 650 aaPredicted RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 C15orf41Q9Y2V0 281 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 DOCK1Q14185 1865 aa4.49□□□□□ -1.69
SSR3-209ENST00000498205 TNS1Q9HBL0 1735 aaKnown RBP4.49□□□□□ -1.69
SSR3-209ENST00000498205 KIAA1217Q5T5P2 1943 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 FER1L6Q2WGJ9 1857 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 A0A087WYN8 130 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 A0A1W2PPI3 338 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SIGLEC16A6NMB1 481 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 ANKRD63C9JTQ0 380 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 APOC4-APOC2K7ER74 178 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SLC16A4O15374 487 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 GRID2O43424 1007 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 CHMP2AO43633 222 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 PRKNO60260 465 aaPredicted RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 EDF1O60869 148 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 TOM1L1O75674 476 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SLC22A3O75751 556 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 HLA-DRAP01903 254 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 APOC2P02655 101 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 VIMP08670 466 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 SUPT20HL2P0C7V6 817 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 CAPN3P20807 821 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 CDKN2BP42772 138 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 BACE1P56817 501 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 MYL6P60660 151 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 NOP14P78316 857 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 MAP2K1Q02750 393 aaPredicted RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 RUNX1T1Q06455 604 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 MXD4Q14582 209 aaPredicted RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 KIR2DS3Q14952 304 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 MEP1AQ16819 746 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SGSM1Q2NKQ1 1148 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 RNASEH2BQ5TBB1 312 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 ARMC3Q5W041 872 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 TBC1D1Q86TI0 1168 aaPredicted RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 FAM228AQ86W67 206 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 LONP2Q86WA8 852 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 TEX9Q8N6V9 391 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 HJURPQ8NCD3 748 aaPredicted RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 DYDC1Q8WWB3 177 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SMPDL3BQ92485 455 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 CEP170P1Q96L14 293 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 TGS1Q96RS0 853 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 SMC6Q96SB8 1091 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 TSPAN18Q96SJ8 248 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SELENOSQ9BQE4 189 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 TEX13BQ9BXU2 312 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 C2orf40Q9H1Z8 148 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 RAD21L1Q9H4I0 556 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 CYP3A43Q9HB55 503 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SEPT11Q9NVA2 429 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 BCCIPQ9P287 314 aaKnown RBP eCLIP4.48□□□□□ -1.69
SSR3-209ENST00000498205 LRRC42Q9Y546 428 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.48□□□□□ -1.69
SSR3-209ENST00000498205 A0A0G2JMZ2 1700 aa4.48□□□□□ -1.69
SSR3-209ENST00000498205 PHIPQ8WWQ0 1821 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 hCG_1818297A0A087WSY0 165 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 IGKV6-21A0A0C4DH24 114 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 EXOC1LA0A1B0GW35 172 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 TMEM8BA6NDV4 472 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 PRSS47A8MTI9 375 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 TCP11X1B4DZS4 312 aa4.47□□□□□ -1.69
SSR3-209ENST00000498205 KBTBD13C9JR72 458 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms