RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SNX31Q8N9S9 440 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 OR5T3Q8NGG3 340 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 BRIX1Q8TDN6 353 aaKnown RBP14.46□□□□□ -0.09
NUP50-219ENST00000497960 UTP15Q8TED0 518 aaKnown RBP14.46□□□□□ -0.09
NUP50-219ENST00000497960 TBC1D20Q96BZ9 403 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 CNDP1Q96KN2 507 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 MRPL57Q9BQC6 102 aaKnown RBP14.46□□□□□ -0.09
NUP50-219ENST00000497960 TMEM79Q9BSE2 394 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 SLC6A16Q9GZN6 736 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 PITHD1Q9GZP4 211 aaPredicted RBP14.46□□□□□ -0.09
NUP50-219ENST00000497960 CLK4Q9HAZ1 481 aaKnown RBP14.46□□□□□ -0.09
NUP50-219ENST00000497960 SENP1Q9P0U3 644 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 PTGFRNQ9P2B2 879 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 DCDC2Q9UHG0 476 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 DOPEY2Q9Y3R5 2298 aa14.46□□□□□ -0.09
NUP50-219ENST00000497960 DYTNA2CJ06 578 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 CHST10O43529 356 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 CCNT2O60583 730 aaKnown RBP14.45□□□□□ -0.1
NUP50-219ENST00000497960 CDC123O75794 336 aaPredicted RBP14.45□□□□□ -0.1
NUP50-219ENST00000497960 FHP07954 510 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 JAK1P23458 1154 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 GSTM2P28161 218 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 RAB8AP61006 207 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 STXBP1P61764 594 aaKnown RBP14.45□□□□□ -0.1
NUP50-219ENST00000497960 ARG2P78540 354 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 SLC18A2Q05940 514 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 TLR1Q15399 786 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 NSDHLQ15738 373 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 PDK4Q16654 411 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 FBXO48Q5FWF7 155 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 TOR1AIP1Q5JTV8 583 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 LANCL3Q6ZV70 420 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 CUZD1Q86UP6 607 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.45□□□□□ -0.1
NUP50-219ENST00000497960 SIRT6Q8N6T7 355 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 CCDC63Q8NA47 563 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 PLPP5Q8NEB5 264 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 CCT6BQ92526 530 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 ESAMQ96AP7 390 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 SNRNP40Q96DI7 357 aaKnown RBP14.45□□□□□ -0.1
NUP50-219ENST00000497960 SEC16BQ96JE7 1060 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 IMMP1LQ96LU5 166 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 RBCK1Q9BYM8 510 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 EHD1Q9H4M9 534 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 MKS1Q9NXB0 559 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 TMEM216Q9P0N5 145 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 PTBP2Q9UKA9 531 aaKnown RBP14.45□□□□□ -0.1
NUP50-219ENST00000497960 SHANK1Q9Y566 2161 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 PCDHGA10Q9Y5H3 936 aa14.45□□□□□ -0.1
NUP50-219ENST00000497960 IGHV3-20A0A0C4DH32 117 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 OR2W5A6NFC9 320 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 PSMD12O00232 456 aaPredicted RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 SEC24DO94855 1032 aaPredicted RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 B3GALT4O96024 378 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 TAC1P20366 129 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 GNLYP22749 145 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 HPDP32754 393 aaPredicted RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 CCT5P48643 541 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 EFNA3P52797 238 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 OLR1P78380 273 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 ACTN3Q08043 901 aaPredicted RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 UBAP2LQ14157 1087 aaKnown RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 ZNF169Q14929 603 aaPredicted RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 ABRAXAS2Q15018 415 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 PFKFB4Q16877 469 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 XKR6Q5GH73 641 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 PAGE2BQ5JRK9 111 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 LRRC70Q7Z2Q7 622 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 ANKRD37Q7Z713 158 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 SHISA5Q8N114 240 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 CREB3L4Q8TEY5 395 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 UBTD2Q8WUN7 234 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 PSMF1Q92530 271 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 C19orf60Q96EN9 201 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 PGM2Q96G03 612 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 FAR2Q96K12 515 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 EFCAB11Q9BUY7 163 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 KLHL31Q9H511 634 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 NT5DC2Q9H857 520 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 PRM3Q9NNZ6 103 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 LANCL2Q9NS86 450 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 TEKT2Q9UIF3 430 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 GRID1Q9ULK0 1009 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 TMCO1Q9UM00 188 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 CSAG2Q9Y5P2 127 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 COPG1Q9Y678 874 aaKnown RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 LRRK2Q5S007 2527 aa14.44□□□□□ -0.1
NUP50-219ENST00000497960 UBR5O95071 2799 aaPredicted RBP14.44□□□□□ -0.1
NUP50-219ENST00000497960 A0A088AWK7 358 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 ANKDD1BA6NHY2 528 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 MAGEB17A8MXT2 336 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 B4GALT2O60909 372 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 SPAG7O75391 227 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 CELA2AP08217 269 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 ITGAMP11215 1152 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 RNH1P13489 461 aaKnown RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 ZNF10P21506 573 aaPredicted RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 CRHR1P34998 444 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 SOX11P35716 441 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 UQCRFS1P47985 274 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms