RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 SP1P08047 785 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 SSTR1P30872 391 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 HNRNPH1P31943 449 aaKnown RBP12.12□□□□□ -0.47
FN1-226ENST00000496542 POU4F1Q01851 419 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TGFBIQ15582 683 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 C3AR1Q16581 482 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 MAPKAPK3Q16644 382 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 FBXO48Q5FWF7 155 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 SP5Q6BEB4 398 aaPredicted RBP12.12□□□□□ -0.47
FN1-226ENST00000496542 SLC25A25Q6KCM7 469 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 MTFR2Q6P444 385 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TMIGD1Q6UXZ0 262 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
FN1-226ENST00000496542 MRGPRGQ86SM5 289 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 KLHDC8AQ8IYD2 350 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 KRT78Q8N1N4 520 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 SNX31Q8N9S9 440 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 FAM98AQ8NCA5 519 aaKnown RBP12.12□□□□□ -0.47
FN1-226ENST00000496542 BBOF1Q8ND07 529 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TTLQ8NG68 377 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 CDKL2Q92772 493 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TSPAN17Q96FV3 270 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 PDLIM2Q96JY6 352 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 GPR137Q96N19 417 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TMEM79Q9BSE2 394 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 MCMBPQ9BTE3 642 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 DEFB126Q9BYW3 111 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 DERL2Q9GZP9 239 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 DNAJC11Q9NVH1 559 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TINAGQ9UJW2 476 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 CSMD1Q96PZ7 3565 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 NCOA6Q14686 2063 aaPredicted RBP12.12□□□□□ -0.47
FN1-226ENST00000496542 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 POLQO75417 2590 aa12.12□□□□□ -0.47
FN1-226ENST00000496542 TRBV11-1A0A0K0K1C0 115 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 FCHO1O14526 889 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 FANCGO15287 622 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 MYO1DO94832 1006 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 WISP3O95389 354 aaPredicted RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 CCDC166P0CW27 439 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 ESRRAP11474 423 aaPredicted RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 GRNP28799 593 aaKnown RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 HSPA7P48741 367 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 CYB561P49447 251 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 MLF1P58340 268 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 ART3Q13508 389 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 RUNX2Q13950 521 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 RPTNQ6XPR3 784 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 GPSM1Q86YR5 675 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 TICAM1Q8IUC6 712 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 SRRM1Q8IYB3 904 aaKnown RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 TCAIMQ8N3R3 496 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 ZNF808Q8N4W9 903 aaPredicted RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 FAM47BQ8NA70 645 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 NFAM1Q8NET5 270 aaPredicted RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 THAP3Q8WTV1 239 aaPredicted RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 ANP32BQ92688 251 aaKnown RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 EXT2Q93063 718 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 MS4A6EQ96DS6 147 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 PRM3Q9NNZ6 103 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 PNO1Q9NRX1 252 aaKnown RBP12.11□□□□□ -0.47
FN1-226ENST00000496542 RNF14Q9UBS8 474 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 DNAJC13O75165 2243 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 ZNF407Q9C0G0 2248 aa12.11□□□□□ -0.47
FN1-226ENST00000496542 A0A088AWK7 358 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 CLGNO14967 610 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 TAPBPO15533 448 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 RAD51CO43502 376 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 B3GALT2O43825 422 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 NME2P1O60361 137 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 S100BP04271 92 aaPredicted RBP12.1□□□□□ -0.47
FN1-226ENST00000496542 PRF1P14222 555 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 STMN1P16949 149 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 ZNF24P17028 368 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
FN1-226ENST00000496542 NME2P22392 152 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 PPP2R1BP30154 601 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 HNRNPFP52597 415 aaKnown RBP12.1□□□□□ -0.47
FN1-226ENST00000496542 PLA2G16P53816 162 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 RAB38P57729 211 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 ILF2Q12905 390 aaKnown RBP12.1□□□□□ -0.47
FN1-226ENST00000496542 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
FN1-226ENST00000496542 OR4D1Q15615 310 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 KRTCAP3Q53RY4 240 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 ADNP2Q6IQ32 1131 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 CLNKQ7Z7G1 428 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 SIAH3Q8IW03 269 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 SCUBE1Q8IWY4 988 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 CTAGE3PQ8IX95 158 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 CPSF7Q8N684 471 aaKnown RBP12.1□□□□□ -0.47
FN1-226ENST00000496542 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 B3GNT7Q8NFL0 401 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 ESAMQ96AP7 390 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 TMEM125Q96AQ2 219 aa12.1□□□□□ -0.47
FN1-226ENST00000496542 GPR22Q99680 433 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms