RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 MAGEB10Q96LZ2 347 aaPredicted RBP16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 OR1F2PQ96R84 312 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 CSF3RQ99062 836 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 SORBS1Q9BX66 1292 aaKnown RBP16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 REXO4Q9GZR2 422 aaKnown RBP16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 RIC8BQ9NVN3 520 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 PTGFRNQ9P2B2 879 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 PLAAQ9Y263 795 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 RNF11Q9Y3C5 154 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 PCDHGB7Q9Y5F8 929 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 CNTRLQ7Z7A1 2325 aa16.53■□□□□ 0.24
RHBDD3-207ENST00000496342 GCN1Q92616 2671 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 A0A1B0GTL3 188 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 A0A1W2PPM1 405 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 A8MT66 165 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 OR7A17O14581 309 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 SORBS2O94875 1100 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 F10P00742 488 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 TGFB1P01137 390 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 COL6A2P12110 1019 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 TSPAN8P19075 237 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 MAOAP21397 527 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 ST13P50502 369 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 LAPTM5Q13571 262 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 HIST2H2ACQ16777 129 aaPredicted RBP16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 SFT2D3Q587I9 215 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 HIST2H2AA3Q6FI13 130 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 ABHD17CQ6PCB6 329 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 TIFABQ6ZNK6 161 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 KBTBD2Q8IY47 623 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 CYP4X1Q8N118 509 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 OR2L5Q8NG80 312 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 VPS50Q96JG6 964 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 FAR2Q96K12 515 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 IMMP1LQ96LU5 166 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 PITHD1Q9GZP4 211 aaPredicted RBP16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 MRPL46Q9H2W6 279 aaKnown RBP16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 OR51B5Q9H339 312 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 IPPKQ9H8X2 491 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 ACTR8Q9H981 624 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 ZBTB26Q9HCK0 441 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 NECTIN3Q9NQS3 549 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 PCTPQ9UKL6 214 aa16.52■□□□□ 0.24
RHBDD3-207ENST00000496342 IQANK1A0A1B0GTG1 560 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 MYOCOSA0A1B0GUC4 107 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 CCDC189A1A4V9 331 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 TGFBR3LH3BV60 316 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 SMIM24O75264 130 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 ALPPP05187 535 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 PYGBP11216 843 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 RNH1P13489 461 aaKnown RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 GSTM2P28161 218 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 SKP1P63208 163 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 NSDHLQ15738 373 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 CPSF6Q16630 551 aaKnown RBP eCLIP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 PLEKHN1Q494U1 663 aaPredicted RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 LGSNQ5TDP6 509 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 AGAP7PQ5VUJ5 663 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 IRAK1BP1Q5VVH5 260 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 PAPD4Q6PIY7 484 aaKnown RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 EIF1ADQ8N9N8 165 aaKnown RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 PLPP5Q8NEB5 264 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 OR2W6PQ8NHA6 318 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 HUS1BQ8NHY5 278 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 MTBPQ96DY7 904 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 PTCHD1Q96NR3 888 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 AGAP4Q96P64 663 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 MTERF1Q99551 399 aaKnown RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 MRPL57Q9BQC6 102 aaKnown RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 NOL11Q9H8H0 719 aaKnown RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 SEMA4BQ9NPR2 832 aaPredicted RBP16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 PRDM7Q9NQW5 492 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 C5AR2Q9P296 337 aa16.51■□□□□ 0.23
RHBDD3-207ENST00000496342 TTLL8A6PVC2 850 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 A8MUA0 341 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 ESPNB1AK53 854 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 STX16-NPEPL1H3BU86 382 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 PSMD12O00232 456 aaPredicted RBP16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 PPP6CO00743 305 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 STX16O14662 325 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 B3GALT2O43825 422 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 SERPINA7P05543 415 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 RPS17P08708 135 aaKnown RBP16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 NEK2P51955 445 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 RAB38P57729 211 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 RPS13P62277 151 aaKnown RBP16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 PCDH1Q08174 1060 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 TRAF3Q13114 568 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 BTBD16Q32M84 506 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 FCRLBQ6BAA4 426 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 CLNKQ7Z7G1 428 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 CNDP1Q96KN2 507 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 TUBB6Q9BUF5 446 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 COPS7BQ9H9Q2 264 aaPredicted RBP16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 DMRT3Q9NQL9 472 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 PLA2G3Q9NZ20 509 aa16.5■□□□□ 0.23
RHBDD3-207ENST00000496342 C19orf25Q9UFG5 118 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 307.4 ms