RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ACTRT2Q8TDY3 377 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 RNF31Q96EP0 1072 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 MVB12AQ96EY5 273 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 OR52B2Q96RD2 323 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 ROGDIQ9GZN7 287 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 DDX31Q9H8H2 851 aaKnown RBP18.48■□□□□ 0.55
ATG3-208ENST00000495756 TXLNGQ9NUQ3 528 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 SIRT5Q9NXA8 310 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 KLHL14Q9P2G3 628 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 NAALAD2Q9Y3Q0 740 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 SEC16AO15027 2179 aa18.48■□□□□ 0.55
ATG3-208ENST00000495756 A0A088AWK7 358 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 A0A0A6YYC8 382 aaPredicted RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 A0A1B0GX78 115 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 C9orf172C9J069 976 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 I3L1I5 382 aaPredicted RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 CPNE3O75131 537 aaKnown RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 EEDO75530 441 aaKnown RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 KLHL18O94889 574 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 SCELO95171 688 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 NSA2O95478 260 aaKnown RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 ZNF28P17035 718 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 ZNF10P21506 573 aaPredicted RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 HIST1H1TP22492 207 aaPredicted RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 ATP5A1P25705 553 aaKnown RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 MTTPP55157 894 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 RPL38P63173 70 aaKnown RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 SKP1P63208 163 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 SF3A3Q12874 501 aaKnown RBP eCLIP18.47■□□□□ 0.55
ATG3-208ENST00000495756 TMEM164Q5U3C3 297 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 NIPAL1Q6NVV3 410 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 GALNT18Q6P9A2 607 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 ACAD11Q709F0 780 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 PAGE2Q7Z2X7 111 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 AMER3Q8N944 861 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 ACOT4Q8N9L9 421 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 STON2Q8WXE9 905 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 CLIP3Q96DZ5 547 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 ELAC2Q9BQ52 826 aaKnown RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 ULBP3Q9BZM4 244 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 B3GNT4Q9C0J1 378 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 RABEP2Q9H5N1 569 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 COPS7BQ9H9Q2 264 aaPredicted RBP18.47■□□□□ 0.55
ATG3-208ENST00000495756 TCF7L2Q9NQB0 619 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 NDOR1Q9UHB4 597 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 ADAM29Q9UKF5 820 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 TMED5Q9Y3A6 229 aa18.47■□□□□ 0.55
ATG3-208ENST00000495756 SGK494L7N484 410 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 KIAA0754O94854 1291 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 KLK1P06870 262 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 LBPP18428 481 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 AVPR1BP47901 424 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 RAE1P78406 368 aaKnown RBP18.46■□□□□ 0.55
ATG3-208ENST00000495756 CAMK2BQ13554 666 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 SMU1Q2TAY7 513 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 NXNQ6DKJ4 435 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 SPATA21Q7Z572 469 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 ZCCHC7Q8N3Z6 543 aaKnown RBP18.46■□□□□ 0.55
ATG3-208ENST00000495756 METTL27Q8N6F8 245 aaPredicted RBP18.46■□□□□ 0.55
ATG3-208ENST00000495756 FNDC5Q8NAU1 212 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 CEP70Q8NHQ1 597 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 FCRL1Q96LA6 429 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 SLC46A1Q96NT5 459 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 SERINC2Q96SA4 455 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 TMEM120AQ9BXJ8 343 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 CDC14AQ9UNH5 594 aa18.46■□□□□ 0.55
ATG3-208ENST00000495756 A0A0A6YYD5 115 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 ZNF860A6NHJ4 632 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 PCDH7O60245 1069 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 MYO1DO94832 1006 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 GBAP04062 536 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 CERS1P27544 350 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 TPP2P29144 1249 aaPredicted RBP18.46■□□□□ 0.54
ATG3-208ENST00000495756 TIA1P31483 386 aaKnown RBP eCLIP18.46■□□□□ 0.54
ATG3-208ENST00000495756 RORAP35398 523 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 ARFIP2P53365 341 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 ERVK-8P63133 956 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 EMX2Q04743 252 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 LSM12Q3MHD2 195 aaKnown RBP18.46■□□□□ 0.54
ATG3-208ENST00000495756 C1orf189Q5VU69 101 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 OGFOD2Q6N063 350 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 NOXRED1Q6NXP6 359 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 PRMT9Q6P2P2 845 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 PROKR1Q8TCW9 393 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 MMABQ96EY8 250 aaPredicted RBP18.46■□□□□ 0.54
ATG3-208ENST00000495756 GBP5Q96PP8 586 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 CCT8L2Q96SF2 557 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 CCDC28BQ9BUN5 200 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 NRSN2Q9GZP1 204 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 FOXJ2Q9P0K8 574 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 MCM8Q9UJA3 840 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 KLK13Q9UKR3 277 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 WASF3Q9UPY6 502 aa18.46■□□□□ 0.54
ATG3-208ENST00000495756 POLR3HQ9Y535 204 aaPredicted RBP18.46■□□□□ 0.54
ATG3-208ENST00000495756 AKAP13Q12802 2813 aa18.45■□□□□ 0.54
ATG3-208ENST00000495756 FER1L5A0AVI2 2057 aa18.45■□□□□ 0.54
ATG3-208ENST00000495756 H0YIG0 161 aa18.45■□□□□ 0.54
ATG3-208ENST00000495756 NVLO15381 856 aaKnown RBP18.45■□□□□ 0.54
ATG3-208ENST00000495756 B3GALT2O43825 422 aa18.45■□□□□ 0.54
ATG3-208ENST00000495756 RDH16O75452 317 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms