RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 MRRFQ96E11 262 aaKnown RBP13.19□□□□□ -0.3
MRPL55-232ENST00000495434 REXO4Q9GZR2 422 aaKnown RBP13.19□□□□□ -0.3
MRPL55-232ENST00000495434 MMP25Q9NPA2 562 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 AGPAT4Q9NRZ5 378 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 ASF1BQ9NVP2 202 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 MAP10Q9P2G4 905 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 OPTCQ9UBM4 332 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 ZNF180Q9UJW8 692 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 IKBKGQ9Y6K9 419 aa13.19□□□□□ -0.3
MRPL55-232ENST00000495434 IGKV3D-11A0A0A0MRZ8 115 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 IGHV3-20A0A0C4DH32 117 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 TCP11X1B4DZS4 312 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 C4orf51C9J302 202 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 ERI3O43414 337 aaKnown RBP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 KLK8O60259 260 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 MYBL2P10244 700 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 EPB42P16452 691 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 CD22P20273 847 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 SERPINB1P30740 379 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 MAGEA12P43365 314 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 UQCRFS1P47985 274 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 TNFSF10P50591 281 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 ALDH18A1P54886 795 aaKnown RBP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 OR4D2P58180 307 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 OLR1P78380 273 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 IRF9Q00978 393 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 TGM3Q08188 693 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 NAA30Q147X3 362 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 SETDB1Q15047 1291 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 INAQ16352 499 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 TRIM40Q6P9F5 258 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 PAPD4Q6PIY7 484 aaKnown RBP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 LAS2Q8IYD9 372 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 CA13Q8N1Q1 262 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
MRPL55-232ENST00000495434 ARMC2Q8NEN0 867 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 CCT6BQ92526 530 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 C19orf60Q96EN9 201 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 PTCHD1Q96NR3 888 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 GPR78Q96P69 363 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 RBCK1Q9BYM8 510 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 STMN3Q9NZ72 180 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 ADGRE2Q9UHX3 823 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 MMACHCQ9Y4U1 282 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 ASB1Q9Y576 335 aa13.18□□□□□ -0.3
MRPL55-232ENST00000495434 A0A087WUV0 522 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-232ENST00000495434 TCRBV16S1A1N1A0A5B0 115 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 B3GALT2O43825 422 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 B4GALT2O60909 372 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 KRT38O76015 456 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 CBX6O95503 412 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 UQCRHP07919 91 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 COL6A2P12110 1019 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 MSH2P43246 934 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 PCBP2Q15366 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
MRPL55-232ENST00000495434 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
MRPL55-232ENST00000495434 FHL5Q5TD97 284 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 MED27Q6P2C8 311 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 ABHD17CQ6PCB6 329 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 IFT20Q8IY31 132 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 LGI4Q8N135 537 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 CATSPER1Q8NEC5 780 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 TSLPQ969D9 159 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 ZNF354BQ96LW1 612 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 KCNC2Q96PR1 638 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 SERINC2Q96SA4 455 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 ROGDIQ9GZN7 287 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 TMCO1Q9UM00 188 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 TSC22D4Q9Y3Q8 395 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 TNPO3Q9Y5L0 923 aaKnown RBP13.17□□□□□ -0.3
MRPL55-232ENST00000495434 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
MRPL55-232ENST00000495434 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 CLDN4O14493 209 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 UGDHO60701 494 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 WDPCPO95876 746 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 ABHD2P08910 425 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 RBP1P09455 135 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 GFAPP14136 432 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 PLA2G16P53816 162 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 MTTPP55157 894 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 HSD17B7P56937 341 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 RAB38P57729 211 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 SLC26A5P58743 744 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 BTG2P78543 158 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 RUNX2Q13950 521 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 RCN2Q14257 317 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 MEP1AQ16819 746 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 TSNAXIP1Q2TAA8 658 aa13.16□□□□□ -0.3
MRPL55-232ENST00000495434 TMEM35AQ53FP2 167 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms