RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PWWP2AQ96N64 755 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 KLF13Q9Y2Y9 288 aaPredicted RBP20.64■□□□□ 0.89
HDDC3-203ENST00000494993 MMACHCQ9Y4U1 282 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 ASB1Q9Y576 335 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 TEX264Q9Y6I9 313 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 CCDC168Q8NDH2 2452 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 NPEPPSL1A6NEC2 478 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 E9PLN8 166 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 PRRG2O14669 202 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 KIR3DL1P43629 444 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 CDKL1Q00532 357 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 FGD2Q7Z6J4 655 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 NKAPQ8N5F7 415 aaKnown RBP20.63■□□□□ 0.89
HDDC3-203ENST00000494993 APCDD1LQ8NCL9 501 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 LRRC39Q96DD0 335 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 DMRTA2Q96SC8 542 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 VKORC1Q9BQB6 163 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 PSAT1Q9Y617 370 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 HCFC1P51610 2035 aa20.63■□□□□ 0.89
HDDC3-203ENST00000494993 PHF3Q92576 2039 aaKnown RBP20.63■□□□□ 0.89
HDDC3-203ENST00000494993 TRBV11-1A0A0K0K1C0 115 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 SAT1P21673 171 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 PTGER1P34995 402 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 MEOX1P50221 254 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 CLCN2P51788 898 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 STXBP1P61764 594 aaKnown RBP20.62■□□□□ 0.89
HDDC3-203ENST00000494993 FRG1Q14331 258 aaKnown RBP20.62■□□□□ 0.89
HDDC3-203ENST00000494993 C3P1Q6ZMU1 363 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 EID3Q8N140 333 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 B3GNT7Q8NFL0 401 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 PDLIM2Q96JY6 352 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 EGFL8Q99944 293 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 OARD1Q9Y530 152 aa20.62■□□□□ 0.89
HDDC3-203ENST00000494993 ADAM10O14672 748 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 TFECO14948 347 aaPredicted RBP20.61■□□□□ 0.89
HDDC3-203ENST00000494993 MYO1DO94832 1006 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 SSTR2P30874 369 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 HNMTP50135 292 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 BTN3A2P78410 334 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 ZNF460Q14592 562 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 TERF2Q15554 542 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 ZC3HC1Q86WB0 502 aaKnown RBP20.61■□□□□ 0.89
HDDC3-203ENST00000494993 SULF2Q8IWU5 870 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 SCUBE1Q8IWY4 988 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.61■□□□□ 0.89
HDDC3-203ENST00000494993 GAL3ST3Q96A11 431 aa20.61■□□□□ 0.89
HDDC3-203ENST00000494993 ANKRD17O75179 2603 aaKnown RBP20.61■□□□□ 0.89
HDDC3-203ENST00000494993 INTS1Q8N201 2190 aaKnown RBP20.61■□□□□ 0.89
HDDC3-203ENST00000494993 CELSR1Q9NYQ6 3014 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 FAM95CA0A1B0GW59 222 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 KLRC4-KLRK1H3BQV0 150 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 WDR47O94967 919 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 C1GALT1C1LP0DN25 315 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 GNAZP19086 355 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 TAS2R39P59534 338 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 MGAT5Q09328 741 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 RUNX2Q13950 521 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 SYDE1Q6ZW31 735 aaPredicted RBP20.6■□□□□ 0.89
HDDC3-203ENST00000494993 KLHDC8AQ8IYD2 350 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 CYP4Z2PQ8N1L4 340 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 TTLQ8NG68 377 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 FAR2Q96K12 515 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 NPLQ9BXD5 320 aaPredicted RBP20.6■□□□□ 0.89
HDDC3-203ENST00000494993 PNO1Q9NRX1 252 aaKnown RBP20.6■□□□□ 0.89
HDDC3-203ENST00000494993 ZNF223Q9UK11 482 aaPredicted RBP20.6■□□□□ 0.89
HDDC3-203ENST00000494993 FBXW2Q9UKT8 454 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 PPT2Q9UMR5 302 aa20.6■□□□□ 0.89
HDDC3-203ENST00000494993 PPIEQ9UNP9 301 aaKnown RBP20.6■□□□□ 0.89
HDDC3-203ENST00000494993 A0A0G2JN53 185 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 PEX1O43933 1283 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 ITGA10O75578 1167 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 TCP1P17987 556 aaKnown RBP20.59■□□□□ 0.89
HDDC3-203ENST00000494993 HNRNPH1P31943 449 aaKnown RBP20.59■□□□□ 0.89
HDDC3-203ENST00000494993 RFC3P40938 356 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 GDF5P43026 501 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 SLC6A12P48065 614 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 ARL4CP56559 192 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 TSNQ15631 228 aaKnown RBP20.59■□□□□ 0.89
HDDC3-203ENST00000494993 C18orf21Q32NC0 220 aaPredicted RBP20.59■□□□□ 0.89
HDDC3-203ENST00000494993 SLCO4C1Q6ZQN7 724 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 FRA10AC1Q70Z53 315 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 ADAMTSL2Q86TH1 951 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 ANKMY2Q8IV38 441 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 TMEM156Q8N614 296 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 C16orf52Q8NHV5 167 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 FAM57AQ8TBR7 257 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 ANKRD49Q8WVL7 239 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 RHBDF1Q96CC6 855 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 MS4A6EQ96DS6 147 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 VMP1Q96GC9 406 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 PRTFDC1Q9NRG1 225 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 CTNNAL1Q9UBT7 734 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 CLDN16Q9Y5I7 305 aa20.59■□□□□ 0.89
HDDC3-203ENST00000494993 A0A1B0GTH9 108 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 TGFBR3LH3BV60 316 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 ZSCAN12O43309 604 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 ERI3O43414 337 aaKnown RBP20.58■□□□□ 0.89
HDDC3-203ENST00000494993 H2AFYO75367 372 aaKnown RBP20.58■□□□□ 0.89
HDDC3-203ENST00000494993 TPOP07202 933 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 PPP2R1BP30154 601 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms