RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 NEDD4P46934 1319 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 EDIL3O43854 480 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 VTNP04004 478 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 PRKACGP22612 351 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 GJB2P29033 226 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 SMSP52788 366 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 LRRC38Q5VT99 294 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 PRAMEF8Q5VWM4 474 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 FIP1L1Q6UN15 594 aaKnown RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 Q71RC1 249 aaPredicted RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 TRMT11Q7Z4G4 463 aaKnown RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 ASPGQ86U10 573 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 CARNMT1Q8N4J0 409 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 C10orf53Q8N6V4 93 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 MSANTD4Q8NCY6 345 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 ZNF519Q8TB69 540 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 RBM4Q9BWF3 364 aaKnown RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 TDRD1Q9BXT4 1180 aaKnown RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 OSBPL8Q9BZF1 889 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 MRPL17Q9NRX2 175 aaKnown RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 FAM212BQ9NTI7 297 aaPredicted RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 C2orf42Q9NWW7 574 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 BAIAP2L1Q9UHR4 511 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 STX8Q9UNK0 236 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 CSNK1G3Q9Y6M4 447 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 ZFYVE16Q7Z3T8 1539 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 C13orf42A0A1B0GVH6 325 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 MAGEB16A2A368 324 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 SLC1A7O00341 560 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 B4GAT1O43505 415 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 ECE2O60344 883 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 LRCH4O75427 683 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 CPA3P15088 417 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 SLC1A3P43003 542 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 IER3P46695 156 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 STX1BP61266 288 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 DHODHQ02127 395 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 IFI44LQ53G44 452 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 ATP1A1-AS1Q5TC04 95 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 UNC45BQ8IWX7 931 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 KLHDC8AQ8IYD2 350 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 THEM5Q8N1Q8 247 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 SFRP1Q8N474 314 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 RPLP0P6Q8NHW5 317 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 SEPT8Q92599 483 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 SNX21Q969T3 373 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 BPIFA2Q96DR5 249 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 OMA1Q96E52 524 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 CNRIP1Q96F85 164 aaPredicted RBP3.8□□□□□ -1.8
SMC4-224ENST00000494612 IL12RB2Q99665 862 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 RSPH9Q9H1X1 276 aaPredicted RBP3.8□□□□□ -1.8
SMC4-224ENST00000494612 IL1RAPL2Q9NP60 686 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 MTRRQ9UBK8 725 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 STRCQ7RTU9 1775 aa3.8□□□□□ -1.8
SMC4-224ENST00000494612 ATP10BO94823 1461 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 UHRF1BP1Q6BDS2 1440 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 SIGLEC1Q9BZZ2 1709 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 PFASO15067 1338 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 A0A087X0K7 114 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 NPIPB9F8W1W9 429 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 SLCO1B7G3V0H7 640 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 M0R296 226 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 GMNNO75496 209 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 AKAP3O75969 853 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 LETM1O95202 739 aaPredicted RBP3.79□□□□□ -1.8
SMC4-224ENST00000494612 ZSCAN5DPP0CG00 497 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 CTNNA2P26232 953 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 TSFMP43897 325 aaKnown RBP3.79□□□□□ -1.8
SMC4-224ENST00000494612 SERPINH1P50454 418 aaKnown RBP3.79□□□□□ -1.8
SMC4-224ENST00000494612 RPP38P78345 283 aaKnown RBP3.79□□□□□ -1.8
SMC4-224ENST00000494612 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 RPS6KA1Q15418 735 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 FCN2Q15485 313 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 TAB1Q15750 504 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 MAPK11Q15759 364 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 ACKR1Q16570 336 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 FAM106AQ4KMX7 169 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 ODF2Q5BJF6 829 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 WLSQ5T9L3 541 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 BSPRYQ5W0U4 402 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 CATSPERDQ86XM0 798 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 ZNRF4Q8WWF5 429 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 SMPDL3AQ92484 453 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 CABS1Q96KC9 395 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 RASL10BQ96S79 203 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 UBAC1Q9BSL1 405 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 GFRA4Q9GZZ7 299 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 RNPEPL1Q9HAU8 725 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 B3GAT2Q9NPZ5 323 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 EXOC1Q9NV70 894 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 TRPC4Q9UBN4 977 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 DBF4Q9UBU7 674 aaPredicted RBP3.79□□□□□ -1.8
SMC4-224ENST00000494612 PSORS1C1Q9UIG5 152 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 LEF1Q9UJU2 399 aaPredicted RBP3.79□□□□□ -1.8
SMC4-224ENST00000494612 FBXW2Q9UKT8 454 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 ZNF510Q9Y2H8 683 aa3.79□□□□□ -1.8
SMC4-224ENST00000494612 SH3GLB1Q9Y371 365 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms