RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 UNC5CO95185 931 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 CCND1P24385 295 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 HTR1EP28566 365 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 LSP1P33241 339 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 PGGT1BP53609 377 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 KLC1Q07866 573 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 GALNT1Q10472 559 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 STX3Q13277 289 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 MFAP5Q13361 173 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 GRB7Q14451 532 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 SLC5A12Q1EHB4 618 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 VWA2Q5GFL6 755 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 FRMPD2BQ6IN97 320 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 ISLR2Q6UXK2 745 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 GFRALQ6UXV0 394 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 CYHR1Q6ZMK1 362 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 LRRC70Q7Z2Q7 622 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 BCORP1Q8N888 145 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 PTGR2Q8N8N7 351 aaPredicted RBP11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 OR5K2Q8NHB8 316 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 CFAP61Q8NHU2 1237 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 BRIX1Q8TDN6 353 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 FBXL8Q96CD0 374 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 MENTQ9BUN1 341 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 C1QTNF3Q9BXJ4 246 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 TRIM8Q9BZR9 551 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 EPS8L2Q9H6S3 715 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 SYNPO2LQ9H987 977 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 THAP1Q9NVV9 213 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 PSD3Q9NYI0 1048 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 VPS13CQ709C8 3753 aa11.14□□□□□ -0.63
CSNK1E-212ENST00000494610 WDR91A4D1P6 747 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 ARHGEF33A8MVX0 844 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 MYO1CO00159 1063 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 DSCR3O14972 297 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 DIAPH2O60879 1101 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 CTSVO60911 334 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 C1orf105O95561 183 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 HSPA4LO95757 839 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 MLYCDO95822 493 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 IMPDH1P20839 514 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 BGNP21810 368 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 PSMB5P28074 263 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 PKLRP30613 574 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 GMPRP36959 345 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 EFNA3P52797 238 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 ARG2P78540 354 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 EEF1A2Q05639 463 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 ART3Q13508 389 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 RCN2Q14257 317 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 ARHGAP19Q14CB8 494 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 PCBP2Q15366 365 aaKnown RBP eCLIP11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 PFKFB4Q16877 469 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 CCSMST1Q4G0I0 132 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 IRAK1BP1Q5VVH5 260 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 FAAH2Q6GMR7 532 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 TMEM151AQ8N4L1 468 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF75CPQ92670 426 aaPredicted RBP11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 FKBP10Q96AY3 582 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 C7orf26Q96N11 449 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 SIKE1Q9BRV8 207 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 CRB3Q9BUF7 120 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 MECRQ9BV79 373 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 CHRNA10Q9GZZ6 450 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 C12orf65Q9H3J6 166 aaKnown RBP11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 OR6C2Q9NZP2 312 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 PDE10AQ9Y233 779 aa11.13□□□□□ -0.63
CSNK1E-212ENST00000494610 LOC105369274A0A096LPK9 316 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 LOC102723532A0A0G2JNH3 316 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 NCF1BA6NI72 391 aaPredicted RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 VSTM2BA6NLU5 285 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 NCF1CA8MVU1 366 aaPredicted RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 KLHL41O60662 606 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 VIMP08670 466 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 RPS17P08708 135 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 CD63P08962 238 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 SBK3P0C264 359 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 MTHFD2P13995 350 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 NCF1P14598 390 aaPredicted RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 TNFSF10P50591 281 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 GYS2P54840 703 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 VSX2P58304 361 aaPredicted RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 ABCE1P61221 599 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 SNRPNP63162 240 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 ADORA2A-AS1P86434 159 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 KIR2DS3Q14952 304 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 PHKG1Q16816 387 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF678Q5SXM1 525 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 FIGLAQ6QHK4 219 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 FRMD7Q6ZUT3 714 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 GDF7Q7Z4P5 450 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 CRLF3Q8IUI8 442 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 SPNS2Q8IVW8 549 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 OR4N4Q8N0Y3 316 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 CCNYL1Q8N7R7 359 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 OR9A1PQ8NGU1 263 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 STT3BQ8TCJ2 826 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 NR4A3Q92570 626 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms