RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 SMSP52788 366 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 BTN3A2P78410 334 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 RUNX2Q13950 521 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 TSNQ15631 228 aaKnown RBP22.32■■□□□ 1.16
TTC3-224ENST00000494243 NCCRP1Q6ZVX7 275 aaPredicted RBP22.32■■□□□ 1.16
TTC3-224ENST00000494243 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.32■■□□□ 1.16
TTC3-224ENST00000494243 GHDCQ8N2G8 530 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 RHBDF1Q96CC6 855 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 CAPZA3Q96KX2 299 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 PHF12Q96QT6 1004 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 EGFL8Q99944 293 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 DEFB126Q9BYW3 111 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 KCNF1Q9H3M0 494 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 ASB1Q9Y576 335 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 CLDN16Q9Y5I7 305 aa22.32■■□□□ 1.16
TTC3-224ENST00000494243 E7ESA3 106 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 C19orf84I3L1E1 186 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 ZNF24P17028 368 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 HNRNPH1P31943 449 aaKnown RBP22.31■■□□□ 1.16
TTC3-224ENST00000494243 SLC6A12P48065 614 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 PDIA2Q13087 525 aaKnown RBP22.31■■□□□ 1.16
TTC3-224ENST00000494243 DOLPP1Q86YN1 238 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 SCUBE1Q8IWY4 988 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 FBXO36Q8NEA4 188 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 CTNNAL1Q9UBT7 734 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 ZNF223Q9UK11 482 aaPredicted RBP22.31■■□□□ 1.16
TTC3-224ENST00000494243 MMACHCQ9Y4U1 282 aa22.31■■□□□ 1.16
TTC3-224ENST00000494243 A0A0G2JN53 185 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 LRIT2A6NDA9 550 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 TGFBR3LH3BV60 316 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 ADAM10O14672 748 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 WDR47O94967 919 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 WISP3O95389 354 aaPredicted RBP22.3■■□□□ 1.16
TTC3-224ENST00000494243 TBX6O95947 436 aaPredicted RBP22.3■■□□□ 1.16
TTC3-224ENST00000494243 COX6B1P14854 86 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 GNAZP19086 355 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 STXBP1P61764 594 aaKnown RBP22.3■■□□□ 1.16
TTC3-224ENST00000494243 CBLBQ13191 982 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 TMIGD1Q6UXZ0 262 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 GDF7Q7Z4P5 450 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 ADAMTSL2Q86TH1 951 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 ZNF295-AS1Q8N0V1 137 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 ARMC2Q8NEN0 867 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 B3GNT7Q8NFL0 401 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 AGAP11Q8TF27 550 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 GAL3ST3Q96A11 431 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 MS4A6EQ96DS6 147 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 PDLIM2Q96JY6 352 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 RUNDC3BQ96NL0 473 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 TRIM8Q9BZR9 551 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 TRIM31Q9BZY9 425 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 SMYD2Q9NRG4 433 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 PPIEQ9UNP9 301 aaKnown RBP22.3■■□□□ 1.16
TTC3-224ENST00000494243 GTF3C1Q12789 2109 aa22.3■■□□□ 1.16
TTC3-224ENST00000494243 TRBV11-1A0A0K0K1C0 115 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 USP27XA6NNY8 438 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 FCHO1O14526 889 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 H2AFYO75367 372 aaKnown RBP22.29■■□□□ 1.16
TTC3-224ENST00000494243 PIAS1O75925 651 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 MYO1DO94832 1006 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 ABOP16442 354 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 GPR143P51810 404 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 HNRNPFP52597 415 aaKnown RBP22.29■■□□□ 1.16
TTC3-224ENST00000494243 SLBPQ14493 270 aaKnown RBP eCLIP22.29■■□□□ 1.16
TTC3-224ENST00000494243 TMEM52Q8NDY8 209 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 TMEM125Q96AQ2 219 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 QRFPRQ96P65 431 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 NPLQ9BXD5 320 aaPredicted RBP22.29■■□□□ 1.16
TTC3-224ENST00000494243 RHOJQ9H4E5 214 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 NT5DC2Q9H857 520 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 POPDC3Q9HBV1 291 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 GPAMQ9HCL2 828 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 PKDREJQ9NTG1 2253 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 OTOGQ6ZRI0 2925 aa22.29■■□□□ 1.16
TTC3-224ENST00000494243 PRAMEF4O60810 478 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 CLDN14O95500 239 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 POU3F2P20265 443 aaPredicted RBP22.28■■□□□ 1.16
TTC3-224ENST00000494243 PPP2R1BP30154 601 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 PTGER1P34995 402 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 CLCN2P51788 898 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 TERF2Q15554 542 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 TGFBIQ15582 683 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 PRAMEF9Q5VWM5 478 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 C3P1Q6ZMU1 363 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 VN1R5Q7Z5H4 357 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 SULF2Q8IWU5 870 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 MTFMTQ96DP5 389 aaKnown RBP22.28■■□□□ 1.16
TTC3-224ENST00000494243 VPS39Q96JC1 886 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 FAR2Q96K12 515 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 DMRTA2Q96SC8 542 aa22.28■■□□□ 1.16
TTC3-224ENST00000494243 PNO1Q9NRX1 252 aaKnown RBP22.28■■□□□ 1.16
TTC3-224ENST00000494243 KLF13Q9Y2Y9 288 aaPredicted RBP22.28■■□□□ 1.16
TTC3-224ENST00000494243 MTO1Q9Y2Z2 717 aaKnown RBP22.28■■□□□ 1.16
TTC3-224ENST00000494243 E9PLN8 166 aa22.27■■□□□ 1.16
TTC3-224ENST00000494243 TAPBPO15533 448 aa22.27■■□□□ 1.16
TTC3-224ENST00000494243 ERI3O43414 337 aaKnown RBP22.27■■□□□ 1.16
TTC3-224ENST00000494243 KIR3DL1P43629 444 aa22.27■■□□□ 1.16
TTC3-224ENST00000494243 MEOX1P50221 254 aa22.27■■□□□ 1.16
TTC3-224ENST00000494243 HSD17B7P56937 341 aa22.27■■□□□ 1.16
TTC3-224ENST00000494243 FRA10AC1Q70Z53 315 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms