RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SIM2Q14190 667 aaPredicted RBP13.21□□□□□ -0.3
VCP-207ENST00000493886 C6orf141Q5SZD1 244 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 ALKBH2Q6NS38 261 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 NUDT18Q6ZVK8 323 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 SETD7Q8WTS6 366 aaKnown RBP13.21□□□□□ -0.3
VCP-207ENST00000493886 TFGQ92734 400 aaPredicted RBP13.21□□□□□ -0.3
VCP-207ENST00000493886 NRBF2Q96F24 287 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 PAK1IP1Q9NWT1 392 aaPredicted RBP13.21□□□□□ -0.3
VCP-207ENST00000493886 NUMA1Q14980 2115 aa13.21□□□□□ -0.3
VCP-207ENST00000493886 TGFB1P01137 390 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 INHBBP09529 407 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 GPX2P18283 190 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 IDSP22304 550 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 KELP23276 732 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 HTR1BP28222 390 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 PPP2R2BQ00005 443 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 IL5RAQ01344 420 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 ENPP2Q13822 863 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 TJAP1Q5JTD0 557 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 PRAMEF13Q5VWM6 474 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 CES5AQ6NT32 575 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 ANKRD54Q6NXT1 300 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 PARM1Q6UWI2 310 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 CAMKMTQ7Z624 323 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 DCUN1D3Q8IWE4 304 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 C2orf73Q8N5S3 287 aaPredicted RBP13.2□□□□□ -0.3
VCP-207ENST00000493886 POP5Q969H6 163 aaKnown RBP13.2□□□□□ -0.3
VCP-207ENST00000493886 TM7SF3Q9NS93 570 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 VNN3Q9NY84 501 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 SELENONQ9NZV5 590 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 SERGEFQ9UGK8 458 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 BAG5Q9UL15 447 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 VPS4AQ9UN37 437 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 MYO1GB0I1T2 1018 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 CCNDBP1O95273 360 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 FUCA1P04066 466 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 FMO3P31513 532 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 CAMK2GQ13555 558 aaPredicted RBP13.2□□□□□ -0.3
VCP-207ENST00000493886 DGCR6Q14129 220 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 ITPRIPL2Q3MIP1 535 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 TTC23Q5W5X9 447 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 LAIR2Q6ISS4 152 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 TMEM184AQ6ZMB5 413 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 DCDC5Q6ZRR9 648 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 FKBP9P1Q75LS8 142 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 GPR155Q7Z3F1 870 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 HDDC3Q8N4P3 179 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 FGF14Q92915 247 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 COQ8BQ96D53 544 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 PYURFQ96I23 114 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 OR51B5Q9H339 312 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 BTNL2Q9UIR0 455 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 PCDHB11Q9Y5F2 797 aa13.2□□□□□ -0.3
VCP-207ENST00000493886 A0A1W2PP55 124 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 KCNK5O95279 499 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 DCTP40126 519 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 GSSP48637 474 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 ZNF763Q0D2J5 394 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 VMACQ2NL98 169 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 ANXA8L1Q5VT79 327 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 LCTLQ6UWM7 567 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 COMMD6Q7Z4G1 85 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 ZZZ3Q8IYH5 903 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 ZNF740Q8NDX6 193 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 RPP25Q9BUL9 199 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 RAD21L1Q9H4I0 556 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 TPT1P8Q9HAU6 139 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 MBNL1Q9NR56 388 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 SIRT5Q9NXA8 310 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 SH3BP4Q9P0V3 963 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 PSME2Q9UL46 239 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 GOLGA4Q13439 2230 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 SLC1A7O00341 560 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 SAP18O00422 153 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 ADH1BP00325 375 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 HOXB6P17509 224 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 C5AR1P21730 350 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 SOX9P48436 509 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 HYAL1Q12794 435 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 PERM1Q5SV97 790 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 CPZQ66K79 652 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 EID3Q8N140 333 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 OXR1Q8N573 874 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 EXO1Q9UQ84 846 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
VCP-207ENST00000493886 DOCK9Q9BZ29 2069 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 CKAP5Q14008 2032 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 LOC100130705A0A1B0GUX0 176 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 GBAP04062 536 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 CHRNB1P11230 501 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 OPRL1P41146 370 aa13.19□□□□□ -0.3
VCP-207ENST00000493886 MAP2K4P45985 399 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms