RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TSSK3Q96PN8 268 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 TBCDQ9BTW9 1192 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 NMUR2Q9GZQ4 415 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 ANKHQ9HCJ1 492 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 PRDM7Q9NQW5 492 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 SLC39A1Q9NY26 324 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 SCN3AQ9NY46 2000 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 FITM1A5D6W6 292 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 TMX2-CTNND1H3BSU7 103 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 POLR1CO15160 346 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 TMPRSS11DO60235 418 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 RDH16O75452 317 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 SCRG1O75711 98 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 JMJD7P0C870 316 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 BCKDHAP12694 445 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 HIST1H1TP22492 207 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 ALAS2P22557 587 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 ATP5A1P25705 553 aaKnown RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 MAPK1P28482 360 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 MAD2L1Q13257 205 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 HERC3Q15034 1050 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 MANEAQ5SRI9 462 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 TLDC1Q6P9B6 456 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 CYP20A1Q6UW02 462 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 PAGE2Q7Z2X7 111 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 SHISA5Q8N114 240 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 ACOT4Q8N9L9 421 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 SRFBP1Q8NEF9 429 aaKnown RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 OR5T3Q8NGG3 340 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 STON2Q8WXE9 905 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 GFM2Q969S9 779 aaKnown RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 LIN37Q96GY3 246 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 QRFPRQ96P65 431 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 AIG1Q9NVV5 245 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 ARMCX1Q9P291 453 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 TMED5Q9Y3A6 229 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 COPG1Q9Y678 874 aaKnown RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 MAU2Q9Y6X3 613 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 PTPRZ1P23471 2315 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 CCDC187A0A096LP49 1063 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 A0A0A6YYD5 115 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 A0A1W2PNU3 283 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 C9JVG2 144 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 FCHO1O14526 889 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 DNAJB6O75190 326 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 LRATO95237 230 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 MAPK12P53778 367 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 MTTPP55157 894 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 MC2RQ01718 297 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 MUM1Q2TAK8 710 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 C11orf24Q96F05 449 aaPredicted RBP18.38■□□□□ 0.53
USP39-218ENST00000493829 RTKNQ9BST9 563 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 DLL3Q9NYJ7 618 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 HCN3Q9P1Z3 774 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 FBXW2Q9UKT8 454 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 SATB2Q9UPW6 733 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 SLC22A7Q9Y694 548 aa18.38■□□□□ 0.53
USP39-218ENST00000493829 SPTBP11277 2137 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 GALR3O60755 368 aaPredicted RBP18.37■□□□□ 0.53
USP39-218ENST00000493829 NTRK1P04629 796 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 SMIM10L1P0DMW3 83 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 STX1BP61266 288 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 SLAMF1Q13291 335 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 RPS6KA2Q15349 733 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 MMP21Q8N119 569 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 EFCAB3Q8N7B9 438 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 ANKS4BQ8N8V4 417 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 CLIP3Q96DZ5 547 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 SMIM10Q96HG1 83 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 EGLN2Q96KS0 407 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 FCRL1Q96LA6 429 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 DDX31Q9H8H2 851 aaKnown RBP18.37■□□□□ 0.53
USP39-218ENST00000493829 ACTR5Q9H9F9 607 aaPredicted RBP18.37■□□□□ 0.53
USP39-218ENST00000493829 TXLNGQ9NUQ3 528 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 MCM8Q9UJA3 840 aa18.37■□□□□ 0.53
USP39-218ENST00000493829 A0A088AWK7 358 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 PLD2O14939 933 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 AKAP10O43572 662 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 FOXS1O43638 330 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 B3GALT2O43825 422 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 FGF5P12034 268 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 IDO1P14902 403 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 ZNF10P21506 573 aaPredicted RBP18.36■□□□□ 0.53
USP39-218ENST00000493829 TAS2R50P59544 299 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 MAT1AQ00266 395 aaKnown RBP18.36■□□□□ 0.53
USP39-218ENST00000493829 ZNF763Q0D2J5 394 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 IL11RAQ14626 422 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 SLC9A5Q14940 896 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 FAM214AQ32MH5 1076 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 GARNL3Q5VVW2 1013 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 GALNT18Q6P9A2 607 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 OR9I1Q8NGQ6 314 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 NUDT8Q8WV74 236 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.36■□□□□ 0.53
USP39-218ENST00000493829 MMABQ96EY8 250 aaPredicted RBP18.36■□□□□ 0.53
USP39-218ENST00000493829 SERINC2Q96SA4 455 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 RBCK1Q9BYM8 510 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 GPR45Q9Y5Y3 372 aa18.36■□□□□ 0.53
USP39-218ENST00000493829 B4E171 279 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 PRKRAO75569 313 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms