RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 B3GNT6Q6ZMB0 384 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 MBOAT1Q6ZNC8 495 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 SLC22A16Q86VW1 577 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 RNF10Q8N5U6 811 aaKnown RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 UTP15Q8TED0 518 aaKnown RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 ZNF669Q96BR6 464 aaPredicted RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 VMP1Q96GC9 406 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 SMC6Q96SB8 1091 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 CCDC77Q9BR77 488 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 TTYH2Q9BSA4 534 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 NECTIN3Q9NQS3 549 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 DEPPQ9NTK1 212 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 KCMF1Q9P0J7 381 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 TRMT6Q9UJA5 497 aaKnown RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 ZFP69BQ9UJL9 534 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 PPIEQ9UNP9 301 aaKnown RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 ERVK-11Q9UQG0 969 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 MMACHCQ9Y4U1 282 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 TCRBV7S3A2A0A539 114 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 A8MVJ9 347 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 FAM47E-STBD1D6RA91 191 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 AVILO75366 819 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 MYO1DO94832 1006 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 B3GALT4O96024 378 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 F7P08709 466 aaPredicted RBP16.44■□□□□ 0.22
NUP50-218ENST00000493456 HIST1H2AGP0C0S8 130 aaPredicted RBP16.44■□□□□ 0.22
NUP50-218ENST00000493456 HIST1H2ADP20671 130 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 AHRP35869 848 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 DHX9Q08211 1270 aaKnown RBP16.44■□□□□ 0.22
NUP50-218ENST00000493456 NDUFAF5Q5TEU4 345 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 ARSKQ6UWY0 536 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 SPNS2Q8IVW8 549 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 CALML6Q8TD86 181 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 HIST1H2AHQ96KK5 128 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 HIST1H2AJQ99878 128 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 AARSD1Q9BTE6 412 aaKnown RBP16.44■□□□□ 0.22
NUP50-218ENST00000493456 H2AFJQ9BTM1 129 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 CLEC4MQ9H2X3 399 aaPredicted RBP16.44■□□□□ 0.22
NUP50-218ENST00000493456 ZNF358Q9NW07 568 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 ZFATQ9P243 1243 aa16.44■□□□□ 0.22
NUP50-218ENST00000493456 PABPN1LA6NDY0 278 aaKnown RBP16.43■□□□□ 0.22
NUP50-218ENST00000493456 FAM166BA8MTA8 275 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 IGHG3P01860 377 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 GLI4P10075 376 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 MAGEA6P43360 314 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 SCTRP47872 440 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 DLX5P56178 289 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 BBS9Q3SYG4 887 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 DUPD1Q68J44 220 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 ZNF585AQ6P3V2 769 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 GK5Q6ZS86 529 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 ZZZ3Q8IYH5 903 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 MYO1HQ8N1T3 1032 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 OR2M7Q8NG81 312 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 OR5M9Q8NGP3 310 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 OR56A3Q8NH54 315 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 EEF1AKMT1Q8WVE0 214 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 ASB15Q8WXK1 588 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 SNF8Q96H20 258 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 BAG1Q99933 345 aaPredicted RBP16.43■□□□□ 0.22
NUP50-218ENST00000493456 GPATCH1Q9BRR8 931 aaKnown RBP16.43■□□□□ 0.22
NUP50-218ENST00000493456 TTTY12Q9BZ98 90 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 GSX1Q9H4S2 264 aaPredicted RBP16.43■□□□□ 0.22
NUP50-218ENST00000493456 RASSF1Q9NS23 344 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 ZNF223Q9UK11 482 aaPredicted RBP16.43■□□□□ 0.22
NUP50-218ENST00000493456 RPH3AQ9Y2J0 694 aaPredicted RBP16.43■□□□□ 0.22
NUP50-218ENST00000493456 FAM215AQ9Y5M1 114 aa16.43■□□□□ 0.22
NUP50-218ENST00000493456 NSD1Q96L73 2696 aaPredicted RBP16.42■□□□□ 0.22
NUP50-218ENST00000493456 ZNF407Q9C0G0 2248 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 A0A0G2JNJ9 132 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 ZCWPW2A0A1B0GU75 182 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 A0A1B0GVC2 190 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 SYNDIG1LA6NDD5 238 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 WDR1O75083 606 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 ZFAND5O76080 213 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 GLSO94925 669 aaPredicted RBP16.42■□□□□ 0.22
NUP50-218ENST00000493456 MLNP12872 115 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 NR0B1P51843 470 aaKnown RBP16.42■□□□□ 0.22
NUP50-218ENST00000493456 AP1S2P56377 157 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 HYAL2Q12891 473 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 PHKG1Q16816 387 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 CAMKMTQ7Z624 323 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 CAND1Q86VP6 1230 aaKnown RBP16.42■□□□□ 0.22
NUP50-218ENST00000493456 GPATCH11Q8N954 259 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 TRPV3Q8NET8 790 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 MAIP1Q8WWC4 291 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 NCLNQ969V3 563 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 PYCR2Q96C36 320 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 MBD6Q96DN6 1003 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 RHBGQ9H310 441 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 LIME1Q9H400 295 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 B4GALT7Q9UBV7 327 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 Q9UFV3 132 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 FBXO5Q9UKT4 447 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 AKAP6Q13023 2319 aa16.42■□□□□ 0.22
NUP50-218ENST00000493456 DNAJC13O75165 2243 aa16.41■□□□□ 0.22
NUP50-218ENST00000493456 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.41■□□□□ 0.22
NUP50-218ENST00000493456 A0A1B0GTL3 188 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms