RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 FAM47BQ8NA70 645 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 FBXO30Q8TB52 745 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SHDQ96IW2 340 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 GSDMCQ9BYG8 508 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 LHX9Q9NQ69 397 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SCOCQ9UIL1 159 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 V9GYQ6 96 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 A0A1W2PRB8 838 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 C7orf72A4D263 438 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 SAC3D1A6NKF1 404 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 OR5K4A6NMS3 321 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 RTCAO00442 366 aaKnown RBP13.39□□□□□ -0.27
PTPN7-216ENST00000492977 SOCS2O14508 198 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 HAT1O14929 419 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 PRKD3O94806 890 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 PRSS23O95084 383 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 C6orf47O95873 294 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 SERPINA1P01009 418 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 LYNP07948 512 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 STARD6P59095 220 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 FZD5Q13467 585 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 VEZF1Q14119 521 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 GAS6Q14393 721 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 RGNQ15493 299 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 ADRM1Q16186 407 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 MPEG1Q2M385 716 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 TUSC1Q2TAM9 212 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 ADPRMQ3LIE5 342 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 KIAA1614Q5VZ46 1190 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 ENPP6Q6UWR7 440 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 PTOV1Q86YD1 416 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 DCP2Q8IU60 420 aaKnown RBP13.39□□□□□ -0.27
PTPN7-216ENST00000492977 PLD3Q8IV08 490 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 CBR4Q8N4T8 237 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 FBXL6Q8N531 539 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 MFSD2AQ8NA29 543 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 MFSD9Q8NBP5 474 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 CIDECQ96AQ7 238 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-216ENST00000492977 SLC47A1Q96FL8 570 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 NELL2Q99435 816 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 SLC6A16Q9GZN6 736 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 CHST8Q9H2A9 424 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 LTB4R2Q9NPC1 389 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 C2orf42Q9NWW7 574 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 TAS2R9Q9NYW1 312 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 TAAR2Q9P1P5 351 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 WNT16Q9UBV4 365 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 ZNF639Q9UID6 485 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 OAZ3Q9UMX2 235 aa13.39□□□□□ -0.27
PTPN7-216ENST00000492977 SAMD4AQ9UPU9 718 aaKnown RBP13.39□□□□□ -0.27
PTPN7-216ENST00000492977 UNC80Q8N2C7 3258 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 IGHV1OR15-9A0A0B4J2B8 117 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 RNF103-CHMP3A0A140T963 221 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 ACOX3O15254 700 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 RASAL1O95294 804 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 SERPIND1P05546 499 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 THEGLP0DJG4 465 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 RGS19P49795 217 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 CLCN2P51788 898 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 EIF2B5Q13144 721 aaKnown RBP13.38□□□□□ -0.27
PTPN7-216ENST00000492977 GAB1Q13480 694 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 TCEA2Q15560 299 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 PRRT3Q5FWE3 981 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 TMEM154Q6P9G4 183 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 EPHX4Q8IUS5 362 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTPN7-216ENST00000492977 TRIM48Q8IWZ4 208 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 FAM20CQ8IXL6 584 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 SRFBP1Q8NEF9 429 aaKnown RBP13.38□□□□□ -0.27
PTPN7-216ENST00000492977 KLHDC7BQ96G42 594 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 PYURFQ96I23 114 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 CDX2Q99626 313 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-216ENST00000492977 CHRDQ9H2X0 955 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 POT1Q9NUX5 634 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 RPS6KA6Q9UK32 745 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 FANCMQ8IYD8 2048 aa13.38□□□□□ -0.27
PTPN7-216ENST00000492977 TRBV23OR9-2A0A075B6M9 112 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 A0A0A6YYD5 115 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KIR2DS5A0A0G2JLQ3 304 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 A0A0G2JNG1 304 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FAM170BA6NMN3 283 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KIR2DS3K7RE56 304 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 BTN3A3O00478 584 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TNFSF14O43557 240 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TMPRSS11DO60235 418 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KRT75O95678 551 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 VIPP01282 170 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 C1QCP02747 245 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 UBTFL6P0CB48 400 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 DRD2P14416 443 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 KDELR2P33947 212 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 SSR2P43308 183 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 TSFMP43897 325 aaKnown RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 BLKP51451 505 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 RPS15AP62244 130 aaKnown RBP13.37□□□□□ -0.27
PTPN7-216ENST00000492977 HYAL2Q12891 473 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FADDQ13158 208 aa13.37□□□□□ -0.27
PTPN7-216ENST00000492977 FZD2Q14332 565 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms