RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	P3H4	Q92791	437 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	KAT2A	Q92830	837 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	RERG	Q96A58	199 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	INTS12	Q96CB8	462 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	IMP4	Q96G21	291 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	VAT1	Q99536	393 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	TTC1	Q99614	292 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	TIMP4	Q99727	224 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	PACSIN1	Q9BY11	444 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	PIGM	Q9H3S5	423 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM96A	Q9H5X1	160 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	SYNPO2L	Q9H987	977 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	LIN28A	Q9H9Z2	209 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	UBP1	Q9NZI7	540 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	HACD3	Q9P035	362 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	IFNK	Q9P0W0	207 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CAMK2A	Q9UQM7	478 aa		4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	YARS2	Q9Y2Z4	477 aa	Known RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC13-219	ENST00000492602	CAD	P27708	2225 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602		A0A087X0T9	212 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602		A0A0U1RQJ8	604 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SYCE3	A1L190	88 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	OR2A25	A4D2G3	310 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	GOLGA6L9	A6NEM1	432 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SAGE2P	A6NJ88	616 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602		A8MUA0	341 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF487	B1APH4	448 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SGK494	L7N484	410 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	KPNA5	O15131	536 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	DLX3	O60479	287 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SHOX2	O60902	331 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	RGS9	O75916	674 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	OR2J2	O76002	312 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ANXA9	O76027	345 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	NSA2	O95478	260 aa	Known RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	TGFA	P01135	160 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602		P04436	131 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	RFPL3S	P0C7P2	107 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	TMEM253	P0C7T8	217 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM228B	P0C875	321 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	TNNT1	P13805	278 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	POU2F1	P14859	743 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC25A16	P16260	332 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	IL1RN	P18510	177 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PTPN3	P26045	913 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ZFP36	P26651	326 aa	Known RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	UGT2B10	P36537	528 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PPARG	P37231	505 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CD79B	P40259	229 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	BCL6	P41182	706 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CCR8	P51685	355 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	NUDT6	P53370	316 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	KCNJ2	P63252	427 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CRYZ	Q08257	329 aa	Known RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	DUSP8	Q13202	625 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	GRB7	Q14451	532 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ELOA3B	Q3SY89	546 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SYTL3	Q4VX76	610 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	XKR6	Q5GH73	641 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	LRRC38	Q5VT99	294 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ANKRD34A	Q69YU3	496 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	C22orf34	Q6ZV56	151 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PRSS41	Q7RTY9	318 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	LUZP1	Q86V48	1076 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CCDC50	Q8IVM0	306 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	GCNT2	Q8N0V5	402 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	RASGEF1C	Q8N431	466 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CLDN19	Q8N6F1	224 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PQLC3	Q8N755	202 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ELOA3	Q8NG57	546 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CFAP61	Q8NHU2	1237 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC35G2	Q8TBE7	412 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM71B	Q8TC56	605 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	HEXDC	Q8WVB3	486 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	TFB1M	Q8WVM0	346 aa	Known RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC44A1	Q8WWI5	657 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ELMO1	Q92556	727 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ULK4	Q96C45	1275 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	MSI2	Q96DH6	328 aa	Known RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PEX11G	Q96HA9	241 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	TEKT5	Q96M29	485 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	DPH7	Q9BTV6	452 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ACAT2	Q9BWD1	397 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	FSD1L	Q9BXM9	530 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PRDM14	Q9GZV8	571 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	CALHM2	Q9HA72	323 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	ACKR4	Q9NPB9	350 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	SACM1L	Q9NTJ5	587 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	FKBPL	Q9UIM3	349 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	PACSIN3	Q9UKS6	424 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	TRHDE	Q9UKU6	1024 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	AAR2	Q9Y312	384 aa	Known RBP	4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	KLK4	Q9Y5K2	254 aa		4.92	□□□□□ -1.62
SEC13-219	ENST00000492602	YLPM1	P49750	1951 aa	Known RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms