RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 BIVMQ86UB2 503 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 SLC13A5Q86YT5 568 aaPredicted RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 GPALPP1Q8IXQ4 340 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 PSD4Q8NDX1 1056 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 B3GNT7Q8NFL0 401 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 OR5M3Q8NGP4 307 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 NT5CQ8TCD5 201 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CD200R1Q8TD46 325 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 CREB3L4Q8TEY5 395 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 C1orf54Q8WWF1 131 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 POLDIP3Q9BY77 421 aaKnown RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 TSGA10Q9BZW7 698 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 LIME1Q9H400 295 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 TIMMDC1Q9NPL8 285 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 RASSF1Q9NS23 344 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 PNPLA3Q9NST1 481 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 DEPPQ9NTK1 212 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 ZNF223Q9UK11 482 aaPredicted RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 YARS2Q9Y2Z4 477 aaKnown RBP7.63□□□□□ -1.19
USP39-216ENST00000490193 FAM215AQ9Y5M1 114 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 COMMD10Q9Y6G5 202 aa7.63□□□□□ -1.19
USP39-216ENST00000490193 A0A0G2JNJ9 132 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 TRBV11-1A0A0K0K1C0 115 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 TRBC2A0A5B9 178 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 FAM47E-STBD1D6RA91 191 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 NPIPA2E9PIF3 369 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 NPIPA3F8WFD2 350 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ACOT7O00154 380 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 NDUFS4O43181 175 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 B4GALT2O60909 372 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 PDE9AO76083 593 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 GLSO94925 669 aaPredicted RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 C8GP07360 202 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 SMIM10L1P0DMW3 83 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 GLI4P10075 376 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 CDH1P12830 882 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 RNH1P13489 461 aaKnown RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 NPPBP16860 134 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 MAOAP21397 527 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 DNASE1P24855 282 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 SSR4P51571 173 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 GPR143P51810 404 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 PPIAP62937 165 aaKnown RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 BASP1P80723 227 aaKnown RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 SP140Q13342 867 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 SNX1Q13596 522 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 SIX1Q15475 284 aaPredicted RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 CCNG2Q16589 344 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 BBS9Q3SYG4 887 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 DEFB134Q4QY38 66 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 SEL1L2Q5TEA6 688 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 NDUFAF5Q5TEU4 345 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ZNF470Q6ECI4 717 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 RTL6Q6ICC9 239 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ARSKQ6UWY0 536 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 B3GNT6Q6ZMB0 384 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ABHD13Q7L211 337 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 PIWIL4Q7Z3Z4 852 aaKnown RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 LMNTD2Q8IXW0 634 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ZZZ3Q8IYH5 903 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 CPNE9Q8IYJ1 553 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 TMEM156Q8N614 296 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ACRBPQ8NEB7 543 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 OR2M7Q8NG81 312 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 RMND5BQ96G75 393 aaPredicted RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 VMP1Q96GC9 406 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 SMIM10Q96HG1 83 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 GPR21Q99679 349 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 GPATCH1Q9BRR8 931 aaKnown RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 HAUS8Q9BT25 410 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 DEFB127Q9H1M4 99 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 CCDC68Q9H2F9 335 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 CLEC4MQ9H2X3 399 aaPredicted RBP7.62□□□□□ -1.19
USP39-216ENST00000490193 NECTIN3Q9NQS3 549 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 Q9UFV3 132 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 ZFP69BQ9UJL9 534 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 PDE10AQ9Y233 779 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 MMACHCQ9Y4U1 282 aa7.62□□□□□ -1.19
USP39-216ENST00000490193 CTAGE9A4FU28 777 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 PINLYPA6NC86 204 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 SYNDIG1LA6NDD5 238 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 AQP7O14520 342 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 SLC16A5O15375 505 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 OR1F1O43749 312 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 SUSD5O60279 629 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 WDR1O75083 606 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 B3GALT4O96024 378 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 ZNF888P0CJ79 500 aaPredicted RBP7.61□□□□□ -1.19
USP39-216ENST00000490193 AHRP35869 848 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 ADH7P40394 386 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 MAGEA6P43360 314 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 SCTRP47872 440 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 GSK3AP49840 483 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 CCR8P51685 355 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 OLR1P78380 273 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 LTBQ06643 244 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 RGS1Q08116 209 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 KIF5AQ12840 1032 aa7.61□□□□□ -1.19
USP39-216ENST00000490193 CTBP1Q13363 440 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms