RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 IGFBP2P18065 325 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 CLCN2P51788 898 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 NR0B1P51843 470 aaKnown RBP14.8□□□□□ -0.04
PLOD3-216ENST00000489927 MSS51Q4VC12 460 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 SPANXN3Q5MJ09 141 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 HECTD2Q5U5R9 776 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 NXPE4Q6UWF7 544 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 SBSNQ6UWP8 590 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 GALNT7Q86SF2 657 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 TMPRSS11BQ86T26 416 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 THOC6Q86W42 341 aaKnown RBP14.8□□□□□ -0.04
PLOD3-216ENST00000489927 IGDCC3Q8IVU1 814 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 TMEM156Q8N614 296 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 GPATCH11Q8N954 259 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 TRPV3Q8NET8 790 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 OR52N2Q8NGI0 321 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 CREB3L4Q8TEY5 395 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 CERS2Q96G23 380 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 PDLIM2Q96JY6 352 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 AIF1LQ9BQI0 150 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 AICDAQ9GZX7 198 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 PELI2Q9HAT8 420 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 NPDC1Q9NQX5 325 aaPredicted RBP14.8□□□□□ -0.04
PLOD3-216ENST00000489927 PLSCR2Q9NRY7 297 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 ZNF223Q9UK11 482 aaPredicted RBP14.8□□□□□ -0.04
PLOD3-216ENST00000489927 FBXW2Q9UKT8 454 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 SLC22A14Q9Y267 594 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 DYRK1BQ9Y463 629 aa14.8□□□□□ -0.04
PLOD3-216ENST00000489927 NKX2-6A6NCS4 301 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 KRT38O76015 456 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 PDE9AO76083 593 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 SERPINA6P08185 405 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 TFF3Q07654 80 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 RBBP5Q15291 538 aaKnown RBP14.79□□□□□ -0.04
PLOD3-216ENST00000489927 TERF2Q15554 542 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 PPP1R3AQ16821 1122 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 TOR1AIP1Q5JTV8 583 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 ARHGAP11AQ6P4F7 1023 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 RPRMLQ8N4K4 120 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 PBKQ96KB5 322 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 UCK2Q9BZX2 261 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 TP63Q9H3D4 680 aaPredicted RBP14.79□□□□□ -0.04
PLOD3-216ENST00000489927 PLAC1Q9HBJ0 212 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 PPANQ9NQ55 473 aaKnown RBP14.79□□□□□ -0.04
PLOD3-216ENST00000489927 PNO1Q9NRX1 252 aaKnown RBP14.79□□□□□ -0.04
PLOD3-216ENST00000489927 KCMF1Q9P0J7 381 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 RNF6Q9Y252 685 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 VWA7Q9Y334 891 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 MMACHCQ9Y4U1 282 aa14.79□□□□□ -0.04
PLOD3-216ENST00000489927 FAM90A27PA6NNH2 459 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 TGFBR3LH3BV60 316 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 PGRMC1O00264 195 aaKnown RBP14.78□□□□□ -0.04
PLOD3-216ENST00000489927 NRDCO43847 1150 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 PPP2R1BP30154 601 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 CHRNB4P30926 498 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 GPR143P51810 404 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 BTN3A2P78410 334 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 EMC4Q5J8M3 183 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 TEDDM1Q5T9Z0 273 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 TMEM211Q6ICI0 200 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 C16orf47Q6ZP98 133 aaPredicted RBP14.78□□□□□ -0.04
PLOD3-216ENST00000489927 SCUBE1Q8IWY4 988 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 LILRB4Q8NHJ6 448 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 GRK7Q8WTQ7 553 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 ASB5Q8WWX0 329 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 NCLNQ969V3 563 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 VMP1Q96GC9 406 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 PDLIM5Q96HC4 596 aaKnown RBP14.78□□□□□ -0.04
PLOD3-216ENST00000489927 NAP1L3Q99457 506 aaPredicted RBP14.78□□□□□ -0.04
PLOD3-216ENST00000489927 TIMMDC1Q9NPL8 285 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 DEPPQ9NTK1 212 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 PPIEQ9UNP9 301 aaKnown RBP14.78□□□□□ -0.04
PLOD3-216ENST00000489927 PPP2R2CQ9Y2T4 447 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 CLDN16Q9Y5I7 305 aa14.78□□□□□ -0.04
PLOD3-216ENST00000489927 A0A0G2JN53 185 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 USP27XA6NNY8 438 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 CDC7O00311 574 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 PRKNO60260 465 aaPredicted RBP14.77□□□□□ -0.05
PLOD3-216ENST00000489927 TOXO94900 526 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 TUBB4AP04350 444 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 FNTAP49354 379 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 SSR4P51571 173 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 HNRNPFP52597 415 aaKnown RBP14.77□□□□□ -0.05
PLOD3-216ENST00000489927 RUNX2Q13950 521 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 PPP1R7Q15435 360 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 BBS9Q3SYG4 887 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 FAM45BPQ6NSW5 357 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 CCDC71Q8IV32 467 aaPredicted RBP14.77□□□□□ -0.05
PLOD3-216ENST00000489927 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.77□□□□□ -0.05
PLOD3-216ENST00000489927 PSD4Q8NDX1 1056 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 TMEM52Q8NDY8 209 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 FAM45AQ8TCE6 357 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 RND1Q92730 232 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 FAR2Q96K12 515 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 NAT9Q9BTE0 207 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 DEFB127Q9H1M4 99 aa14.77□□□□□ -0.05
PLOD3-216ENST00000489927 LIN28AQ9H9Z2 209 aaKnown RBP14.77□□□□□ -0.05
PLOD3-216ENST00000489927 CORO1CQ9ULV4 474 aaPredicted RBP14.77□□□□□ -0.05
PLOD3-216ENST00000489927 ERVK-11Q9UQG0 969 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms