RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PTCHD1Q96NR3 888 aa10.99□□□□□ -0.65
ACTN4-206ENST00000489451 CHST11Q9NPF2 352 aa10.99□□□□□ -0.65
ACTN4-206ENST00000489451 TEX264Q9Y6I9 313 aa10.99□□□□□ -0.65
ACTN4-206ENST00000489451 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
ACTN4-206ENST00000489451 EML6Q6ZMW3 1958 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 HCFC1P51610 2035 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 NPEPPSL1A6NEC2 478 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 TMEM200CA6NKL6 621 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 A8MUA0 341 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PRKNO60260 465 aaPredicted RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PRMT3O60678 531 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PRAMEF4O60810 478 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 WISP3O95389 354 aaPredicted RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 CLDN14O95500 239 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 SERPIND1P05546 499 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 HIST1H2AGP0C0S8 130 aaPredicted RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 MYBL2P10244 700 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 COX6B1P14854 86 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 HIST1H2ADP20671 130 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 HNRNPH1P31943 449 aaKnown RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 RFC3P40938 356 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 ELK3P41970 407 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 GPR143P51810 404 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 ITGA8P53708 1063 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PDAP1Q13442 181 aaKnown RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 MAPKAPK3Q16644 382 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PRAMEF9Q5VWM5 478 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 NXPE4Q6UWF7 544 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 C16orf47Q6ZP98 133 aaPredicted RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 TMPRSS11BQ86T26 416 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 THOC6Q86W42 341 aaKnown RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 SCUBE1Q8IWY4 988 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PALM2Q8IXS6 379 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 BBOF1Q8ND07 529 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 ANKRD49Q8WVL7 239 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 MTFMTQ96DP5 389 aaKnown RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PDLIM5Q96HC4 596 aaKnown RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 HIST1H2AHQ96KK5 128 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 HIST1H2AJQ99878 128 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 TREX2Q9BQ50 279 aaPredicted RBP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 MCMBPQ9BTE3 642 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 H2AFJQ9BTM1 129 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 PELI2Q9HAT8 420 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 ZFATQ9P243 1243 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 CHMP2BQ9UQN3 213 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 SLC22A14Q9Y267 594 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 VWA7Q9Y334 891 aa10.98□□□□□ -0.65
ACTN4-206ENST00000489451 NIPBLQ6KC79 2804 aaeCLIP10.98□□□□□ -0.65
ACTN4-206ENST00000489451 A0A0G2JN53 185 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ENO2P09104 434 aaPredicted RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ESRRAP11474 423 aaPredicted RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ZNF24P17028 368 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 JAK1P23458 1154 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 HLCSP50747 726 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ARL4CP56559 192 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 TAS2R50P59544 299 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ETF1P62495 437 aaKnown RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 RGS1Q08116 209 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 RUNX2Q13950 521 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 CSHL1Q14406 222 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 FASTKD3Q14CZ7 662 aaKnown RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 TOR1AIP1Q5JTV8 583 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ADNP2Q6IQ32 1131 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 FAM45BPQ6NSW5 357 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ABHD13Q7L211 337 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 MAATS1Q7Z4T9 603 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 MDGA2Q7Z553 956 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 VN1R5Q7Z5H4 357 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 SULF2Q8IWU5 870 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 KLHDC8AQ8IYD2 350 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 CYP4X1Q8N118 509 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 GHDCQ8N2G8 530 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 PHF10Q8WUB8 498 aaKnown RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 LRRC39Q96DD0 335 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 KRT12Q99456 494 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 RHBGQ9H310 441 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 PPANQ9NQ55 473 aaKnown RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 PRDM9Q9NQV7 894 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 DEPPQ9NTK1 212 aa10.97□□□□□ -0.65
ACTN4-206ENST00000489451 CORO1CQ9ULV4 474 aaPredicted RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 PPIEQ9UNP9 301 aaKnown RBP10.97□□□□□ -0.65
ACTN4-206ENST00000489451 ZNF407Q9C0G0 2248 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 TRBV11-1A0A0K0K1C0 115 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 PINLYPA6NC86 204 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 EFCAB8A8MWE9 144 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 CDK2AP1O14519 115 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 PIAS1O75925 651 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 SERPINA6P08185 405 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 RNH1P13489 461 aaKnown RBP10.96□□□□□ -0.65
ACTN4-206ENST00000489451 ABOP16442 354 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 GDF5P43026 501 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 SLC6A12P48065 614 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 CYB561P49447 251 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 MEOX1P50221 254 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 SMSP52788 366 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 CASP6P55212 293 aa10.96□□□□□ -0.65
ACTN4-206ENST00000489451 TAS2R39P59534 338 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms