RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 PRAMEF13Q5VWM6 474 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 FOXB2Q5VYV0 432 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 FAM219BQ5XKK7 198 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 METRNLQ641Q3 311 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ALKBH2Q6NS38 261 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 KIAA1161Q6NSJ0 714 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 NXPE4Q6UWF7 544 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 PIWIL3Q7Z3Z3 882 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TRMT11Q7Z4G4 463 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 C11orf96Q7Z7L8 435 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TMPRSS11BQ86T26 416 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF547Q8IVP9 402 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 METTL4Q8N3J2 472 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 C1orf52Q8N6N3 182 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ZBTB44Q8NCP5 570 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ABHD11Q8NFV4 315 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TTLQ8NG68 377 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 OR5K2Q8NHB8 316 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 NCLNQ969V3 563 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 MTFMTQ96DP5 389 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 VPS50Q96JG6 964 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 MTERF1Q99551 399 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 SEPHS2Q99611 448 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TIMM29Q9BSF4 260 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ASPSCR1Q9BZE9 553 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 GABARAPL1Q9H0R8 117 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 RBM38Q9H0Z9 239 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 RHBGQ9H310 441 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 MTG2Q9H4K7 406 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 REEP4Q9H6H4 257 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 NTN4Q9HB63 628 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 IL1RAPQ9NPH3 570 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 WASH6PQ9NQA3 447 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 DMRT3Q9NQL9 472 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 EBF1Q9UH73 591 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 BLOC1S6Q9UL45 172 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 MMP17Q9ULZ9 603 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 PCDHGB4Q9UN71 923 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ICKQ9UPZ9 632 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF451Q9Y4E5 1061 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ORC6Q9Y5N6 252 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 HSPE1-MOB4S4R3N1 261 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 DOCK9Q9BZ29 2069 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 RALGAPA1Q6GYQ0 2036 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 THADAQ6YHU6 1953 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 A0A1W2PQF6 199 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 C1orf226A1L170 272 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 EIF4E1BA6NMX2 242 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ENO4A6NNW6 628 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PROB1E7EW31 1015 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 GNGT2O14610 69 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PCDH7O60245 1069 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 MRPS14O60783 128 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PRKD3O94806 890 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 KCNK5O95279 499 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 FKBP9O95302 570 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 IFNA14P01570 189 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 HOXC4P09017 264 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 SP9P0CG40 484 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF8P17098 575 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 CDH2P19022 906 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PDHA2P29803 388 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 NTSR1P30989 418 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 IL12RB1P42701 662 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 BDKRB1P46663 353 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 MAP2K3P46734 347 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 EIF1AXP47813 144 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 GABARAPL2P60520 117 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 RPS21P63220 83 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 RAE1P78406 368 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PPP2R2BQ00005 443 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 CDK3Q00526 305 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 CNTN1Q12860 1018 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 SLBPQ14493 270 aaKnown RBP eCLIP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 NADK2Q4G0N4 442 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 C2orf27AQ580R0 203 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 EGFLAMQ63HQ2 1017 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF776Q68DI1 518 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 OR4F3Q6IEY1 312 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 IYDQ6PHW0 289 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 SHQ1Q6PI26 577 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 XKR5Q6UX68 686 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 TMIGD1Q6UXZ0 262 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 B3GNT6Q6ZMB0 384 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 EIF3MQ7L2H7 374 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 SATL1Q86VE3 508 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 HEATR4Q86WZ0 1026 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 MMAAQ8IVH4 418 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 CLEC4FQ8N1N0 589 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 CAMKK1Q8N5S9 505 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF366Q8N895 744 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF555Q8NEP9 628 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 CLHC1Q8NHS4 586 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 RPLP0P6Q8NHW5 317 aa8.1□□□□□ -1.11
VTI1A-207ENST00000489357 ZNF420Q8TAQ5 688 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 MAGEE2Q8TD90 523 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-207ENST00000489357 SMPDL3AQ92484 453 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms