RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 HRH2P25021 359 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 VARSP26640 1264 aaKnown RBP18.46■□□□□ 0.55
CCM2-216ENST00000488727 MSX2P35548 267 aaPredicted RBP18.46■□□□□ 0.55
CCM2-216ENST00000488727 AQP4P55087 323 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 ERVK-8P63133 956 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 MC2RQ01718 297 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 MEF2AQ02078 507 aaPredicted RBP18.46■□□□□ 0.55
CCM2-216ENST00000488727 GTF2H2Q13888 395 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 PDCD4Q53EL6 469 aaKnown RBP18.46■□□□□ 0.55
CCM2-216ENST00000488727 TMTC4Q5T4D3 741 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 GTF2H2CQ6P1K8 395 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 METTL2BQ6P1Q9 378 aaKnown RBP18.46■□□□□ 0.55
CCM2-216ENST00000488727 FBXO42Q6P3S6 717 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 NXPE4Q6UWF7 544 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 SLCO4C1Q6ZQN7 724 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 RNF44Q7L0R7 432 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 TICAM1Q8IUC6 712 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 OR4K1Q8NGD4 311 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 FGF21Q9NSA1 209 aa18.46■□□□□ 0.55
CCM2-216ENST00000488727 GEMIN8Q9NWZ8 242 aaKnown RBP18.46■□□□□ 0.55
CCM2-216ENST00000488727 TCRBV3S1A0A5B6 114 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 ANGPT2O15123 496 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 OR4F21O95013 312 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 MSL3P1P0C860 447 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 JMJD7P0C870 316 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 EPB42P16452 691 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 GABREP78334 506 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 RHDQ02161 417 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 RPS6KA2Q15349 733 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 C6orf10Q5SRN2 563 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 RNF165Q6ZSG1 346 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 SPATA24Q86W54 205 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 FAM156AQ8NDB6 213 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 ZNF740Q8NDX6 193 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 ZNF501Q96CX3 271 aaPredicted RBP18.45■□□□□ 0.54
CCM2-216ENST00000488727 POLR1BQ9H9Y6 1135 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 PELI2Q9HAT8 420 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 GID8Q9NWU2 228 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 ZIM2Q9NZV7 527 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 NEUROG3Q9Y4Z2 214 aa18.45■□□□□ 0.54
CCM2-216ENST00000488727 A0A0J9YVX5 310 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 MED19A0JLT2 244 aaPredicted RBP18.44■□□□□ 0.54
CCM2-216ENST00000488727 FEZF1A0PJY2 475 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 B4E171 279 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 FXYD1O00168 92 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 CD22P20273 847 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 TSPAN7P41732 249 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 CCR8P51685 355 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 SLC7A2P52569 658 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 MAPK10P53779 464 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 ERVPABLB-1P60509 514 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 ACY1Q03154 408 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 RCAN2Q14206 197 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 LRRC36Q1X8D7 754 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 GRAMD1BQ3KR37 738 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 FRMPD2BQ6IN97 320 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 HOMEZQ8IX15 550 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 ICA1LQ8NDH6 482 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 CTRCQ99895 268 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 ZFYVE21Q9BQ24 234 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 NRSN2Q9GZP1 204 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 IPPKQ9H8X2 491 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 FBXO8Q9NRD0 319 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 ANGPTL3Q9Y5C1 460 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 PCDHGA8Q9Y5G5 932 aa18.44■□□□□ 0.54
CCM2-216ENST00000488727 LOC105369274A0A096LPK9 316 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 LOC102723532A0A0G2JNH3 316 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 TMEM150CB9EJG8 249 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 C1GALT1C1LP0DN25 315 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 HSD17B1P14061 328 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 TCN1P20061 433 aaPredicted RBP18.43■□□□□ 0.54
CCM2-216ENST00000488727 RELAQ04206 551 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 CYP4F3Q08477 520 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 CHIT1Q13231 466 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 ATG9BQ674R7 924 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 MCATQ8IVS2 390 aaKnown RBP18.43■□□□□ 0.54
CCM2-216ENST00000488727 OR4N4Q8N0Y3 316 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 LILRA2Q8N149 483 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 TMEM102Q8N9M5 508 aaPredicted RBP18.43■□□□□ 0.54
CCM2-216ENST00000488727 OR52B6Q8NGF0 335 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 OR2T11Q8NH01 316 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 OR1L3Q8NH93 324 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 OR2A5Q96R48 311 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 NOL11Q9H8H0 719 aaKnown RBP18.43■□□□□ 0.54
CCM2-216ENST00000488727 SLC39A1Q9NY26 324 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 PLCL2Q9UPR0 1127 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 MSRB2Q9Y3D2 182 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 NCOR2Q9Y618 2525 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 A0A1W2PP18 115 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 DPPA5A6NC42 116 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 H3BMH7 237 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 OR7A17O14581 309 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 CLGNO14967 610 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 LCMT2O60294 686 aaKnown RBP18.43■□□□□ 0.54
CCM2-216ENST00000488727 TNFSF15O95150 251 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 OTCP00480 354 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 LYNP07948 512 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 ZFP36L2P47974 494 aaKnown RBP18.43■□□□□ 0.54
CCM2-216ENST00000488727 DIO3P55073 304 aa18.43■□□□□ 0.54
CCM2-216ENST00000488727 REEP5Q00765 189 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms