RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ATG14Q6ZNE5 492 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 UBE3DQ7Z6J8 389 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CUZD1Q86UP6 607 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 NUDCD3Q8IVD9 361 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 PPP1R14CQ8TAE6 165 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 AGR3Q8TD06 166 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 CMTM7Q96FZ5 175 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 SLC45A3Q96JT2 553 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.73
UBE4B-210ENST00000488228 QRFPRQ96P65 431 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 SPSB2Q99619 263 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 COPS7BQ9H9Q2 264 aaPredicted RBP10.46□□□□□ -0.73
UBE4B-210ENST00000488228 KCND3Q9UK17 655 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 TCFL5Q9UL49 500 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 PADI2Q9Y2J8 665 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 FIS1Q9Y3D6 152 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 TSC22D4Q9Y3Q8 395 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 MAP4K5Q9Y4K4 846 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 PCDHGA6Q9Y5G7 932 aa10.46□□□□□ -0.73
UBE4B-210ENST00000488228 NBEAQ8NFP9 2946 aa10.46□□□□□ -0.74
UBE4B-210ENST00000488228 DOCK10Q96BY6 2186 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 CDC14CA4D256 554 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 URADA6NGE7 173 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 H0YIG0 161 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 PLPP1O14494 284 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 BIRC5O15392 142 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 NKX2-8O15522 239 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 NPHS1O60500 1241 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 CDC123O75794 336 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 KRT6AP02538 564 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 KRT6BP04259 564 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 UMODP07911 640 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 FURINP09958 794 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SMIM10L1P0DMW3 83 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 PIM1P11309 404 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 CHN1P15882 459 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SERPINB3P29508 390 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 OTX2P32243 289 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SSR2P43308 183 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 KRT6CP48668 564 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 RAP1GDS1P52306 607 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 EFNA3P52797 238 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 NAA20P61599 178 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 CDC20Q12834 499 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 ARL13AQ5H913 290 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SCIMPQ6UWF3 145 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 OVCH1Q7RTY7 1134 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 OR2Y1Q8NGV0 311 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 OR51Q1Q8NH59 317 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 METTL6Q8TCB7 284 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 STT3BQ8TCJ2 826 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SELENOMQ8WWX9 145 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SREK1Q8WXA9 508 aaKnown RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 PEX11GQ96HA9 241 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SMIM10Q96HG1 83 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 FAR2Q96K12 515 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 MESP1Q9BRJ9 268 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 TRMOQ9BU70 441 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 GPR87Q9BY21 358 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 ZNF717Q9BY31 904 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SLC26A1Q9H2B4 701 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 ACBD3Q9H3P7 528 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 WDR54Q9H977 334 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 NKIRAS1Q9NYS0 192 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 ZNF282Q9UDV7 671 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 ADGRE2Q9UHX3 823 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 SNX6Q9UNH7 406 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 FARSAQ9Y285 508 aaKnown RBP10.45□□□□□ -0.74
UBE4B-210ENST00000488228 PTGDR2Q9Y5Y4 395 aa10.45□□□□□ -0.74
UBE4B-210ENST00000488228 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 IGLV3-12A0A075B6K2 115 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 VSTM2BA6NLU5 285 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ZNF891A8MT65 544 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 HMGB1P1B2RPK0 211 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 FOXE1O00358 373 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CHST10O43529 356 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ITM2AO43736 263 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 B3GALT2O43825 422 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 EEDO75530 441 aaKnown RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CREG1O75629 220 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 SERPINE1P05121 402 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ZGLP1P0C6A0 271 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 UCNP55089 124 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 MTTPP55157 894 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 SKP1P63208 163 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 OCA2Q04671 838 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 KLC1Q07866 573 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 TGM3Q08188 693 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 VAC14Q08AM6 782 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ERV3-1Q14264 604 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ABRAXAS2Q15018 415 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 COL28A1Q2UY09 1125 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 TMEM35AQ53FP2 167 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 MFSD4BQ5TF39 518 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 KANK2Q63ZY3 851 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CHSY3Q70JA7 882 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CA13Q8N1Q1 262 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 FAM47BQ8NA70 645 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 OR6Y1Q8NGX8 325 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms