RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ERI3O43414 337 aaKnown RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PIAS2O75928 621 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 STAMBPO95630 424 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 STATHP02808 62 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 SERPIND1P05546 499 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TSFMP43897 325 aaKnown RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PLA2G16P53816 162 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TRA2BP62995 288 aaKnown RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 GAB1Q13480 694 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TOR1AIP1Q5JTV8 583 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 OGFOD3Q6PK18 319 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 FIGLAQ6QHK4 219 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 OOSP2Q86WS3 158 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 MMP21Q8N119 569 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 C10orf111Q8N326 155 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 DTWD1Q8N5C7 304 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 AMER3Q8N944 861 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 VPS37AQ8NEZ2 397 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 OR2T12Q8NG77 320 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 OR10A6Q8NH74 314 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 BAHD1Q8TBE0 780 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 RSC1A1Q92681 617 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 SLCO4A1Q96BD0 722 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 NECAB3Q96P71 396 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 KCNC2Q96PR1 638 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 MACROD1Q9BQ69 325 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ECSITQ9BQ95 431 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 THUMPD3Q9BV44 507 aaKnown RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PRDM7Q9NQW5 492 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 TEX10Q9NXF1 929 aaPredicted RBP8.99□□□□□ -0.97
SF3B1-211ENST00000487698 SH3BP4Q9P0V3 963 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 MAGEL2Q9UJ55 1249 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 RIMS3Q9UJD0 308 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 POMT2Q9UKY4 750 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 SCN3AQ9NY46 2000 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 PCDH15Q96QU1 1955 aa8.99□□□□□ -0.97
SF3B1-211ENST00000487698 ARHGAP10A1A4S6 786 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 FAM220BPB1ANY3 271 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 CASQ2O14958 399 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 GPR37L1O60883 481 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 SCELO95171 688 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ANP32DO95626 131 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 BAG2O95816 211 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 C1QCP02747 245 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 GGT1P19440 569 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 EFNA1P20827 205 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 HIST1H1TP22492 207 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 VHLP40337 213 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 CTSKP43235 329 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 SSR2P43308 183 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 C21orf59P57076 290 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 PPP1CAP62136 330 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 PMS2CLQ68D20 193 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 MRM1Q6IN84 353 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 RNF44Q7L0R7 432 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF551Q7Z340 670 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF438Q7Z4V0 828 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ASPGQ86U10 573 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 TICAM1Q8IUC6 712 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 MAML2Q8IZL2 1156 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 PQLC1Q8N2U9 271 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ZCCHC7Q8N3Z6 543 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 FAM47BQ8NA70 645 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 CIDECQ96AQ7 238 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 THAP11Q96EK4 314 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 LRGUKQ96M69 825 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 FCRL4Q96PJ5 515 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 TRIM4Q9C037 500 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 PIF1Q9H611 641 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 RPF2Q9H7B2 306 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ERVMER34-1Q9H9K5 563 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 MIEF1Q9NQG6 463 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 UCKL1Q9NWZ5 548 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 C6orf203Q9P0P8 240 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 A0A0G2JN53 185 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 A0A1B0GVT2 93 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 CLIC1O00299 241 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 P2RX6O15547 441 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 CPSF4O95639 269 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 PVRP15151 417 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 NCK1P16333 377 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 GPX2P18283 190 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ATP5A1P25705 553 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 SLC7A1P30825 629 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 FRKP42685 505 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 CAPZBP47756 277 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 STXBP1P61764 594 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 BNC1Q01954 994 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ABHD18Q0P651 414 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 HEPACAMQ14CZ8 416 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 DEFB133Q30KQ1 61 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 AASDHQ4L235 1098 aaPredicted RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 LYSMD4Q5XG99 296 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 TRIM40Q6P9F5 258 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 PROSER1Q86XN7 944 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 SPPL2CQ8IUH8 684 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 LILRA2Q8N149 483 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ACOT4Q8N9L9 421 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 SRFBP1Q8NEF9 429 aaKnown RBP8.98□□□□□ -0.97
SF3B1-211ENST00000487698 GAL3ST3Q96A11 431 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms