RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 KIR2DS3Q14952 304 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 SLC18A3Q16572 532 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 ASTE1Q2TB18 679 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TIGD2Q4W5G0 525 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 IRAK1BP1Q5VVH5 260 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 ATG9BQ674R7 924 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 COX15Q7KZN9 410 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 SNX20Q7Z614 316 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 DAAM2Q86T65 1068 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 FJX1Q86VR8 437 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 VRK3Q8IV63 474 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TBC1D21Q8IYX1 336 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF567Q8N184 647 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 PPM1NQ8N819 430 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 OR11G2Q8NGC1 345 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 OR4K2Q8NGD2 314 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 BLOC1S5Q8TDH9 187 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TFB1MQ8WVM0 346 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 PSMF1Q92530 271 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 JADE3Q92613 823 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 DCUN1D1Q96GG9 259 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 RBM41Q96IZ5 413 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TAAR6Q96RI8 345 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 COPS8Q99627 209 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TREX2Q9BQ50 279 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 FICDQ9BVA6 458 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 MAK16Q9BXY0 300 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 SPRTNQ9H040 489 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 EPS8L2Q9H6S3 715 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 ASB8Q9H765 288 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 VPS37BQ9H9H4 285 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TXLNGQ9NUQ3 528 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 EURLQ9NYK6 297 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 MOCS1Q9NZB8 636 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 ABI3Q9P2A4 366 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 CTTNBP2NLQ9P2B4 639 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 DHCR7Q9UBM7 475 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 POLG2Q9UHN1 485 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 FEZ2Q9UHY8 353 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 TRHDEQ9UKU6 1024 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 AKAP9Q99996 3911 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 NAV3Q8IVL0 2385 aa4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 ANKHD1Q8IWZ3 2542 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-218ENST00000487294 A0A087X1B8 175 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 TRAV17A0A0B4J275 112 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SLC5A10A0PJK1 596 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 CCDC78A2IDD5 438 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SMTNL1A8MU46 457 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 HACD1B0YJ81 288 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 TARM1B6A8C7 271 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 MASP2O00187 686 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 QSOX1O00391 747 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 RNASET2O00584 256 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 DSCR3O14972 297 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SRPX2O60687 465 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 ANXA9O76027 345 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 USP1O94782 785 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 ZRANB2O95218 330 aaKnown RBP eCLIP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 AP2A1O95782 977 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 AMY1AP04745 511 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 CHRM5P08912 532 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 ITGALP20701 1170 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 HTR1EP28566 365 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 PDHA2P29803 388 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 PBLDP30039 288 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SLC1A1P43005 524 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 CARSP49589 748 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF140P52738 457 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 RAP2BP61225 183 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 PTPRCAPQ14761 206 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 TUBB8Q3ZCM7 444 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 TCTE1Q5JU00 501 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 C1orf189Q5VU69 101 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF449Q6P9G9 518 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 NPNTQ6UXI9 565 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 DET1Q7L5Y6 550 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 MRGPRGQ86SM5 289 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 HOOK3Q86VS8 718 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SLC25A41Q8N5S1 370 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 IPMKQ8NFU5 416 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 OR5K2Q8NHB8 316 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 NRG4Q8WWG1 115 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 CTNNBL1Q8WYA6 563 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 N4BP2L2Q92802 583 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 NRTNQ99748 197 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 GBA3Q9H227 469 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 DDX56Q9NY93 547 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SPHK1Q9NYA1 384 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 CDC23Q9UJX2 597 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 AAR2Q9Y312 384 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 LUC7L2Q9Y383 392 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 PCDHGB6Q9Y5F9 930 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 ARL5AQ9Y689 179 aa4.84□□□□□ -1.63
R3HDM1-218ENST00000487294 SNRNP200O75643 2136 aaKnown RBP4.84□□□□□ -1.64
R3HDM1-218ENST00000487294 CACNA1CQ13936 2221 aa4.83□□□□□ -1.64
R3HDM1-218ENST00000487294 LOC102723996A0A087X1L8 192 aa4.83□□□□□ -1.64
R3HDM1-218ENST00000487294 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms