RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZNF10P21506 573 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 TPP2P29144 1249 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 VHLP40337 213 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 EIF1AXP47813 144 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 FASLGP48023 281 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 FNTBP49356 437 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 DHPSP49366 369 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CSNK1EP49674 416 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ERFP50548 548 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 SESN3P58005 492 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 PHC1P78364 1004 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 MRPS22P82650 360 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 RHDQ02161 417 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 KLC1Q07866 573 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ABHD18Q0P651 414 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 PDE7AQ13946 482 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 SIM2Q14190 667 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 SLC9A5Q14940 896 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ADPRMQ3LIE5 342 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 TOR1AIP1Q5JTV8 583 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 IRAK1BP1Q5VVH5 260 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 LYSMD4Q5XG99 296 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CWF19L1Q69YN2 538 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 LCN8Q6JVE9 175 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 SPESP1Q6UW49 350 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 LRRC74BQ6ZQY2 392 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF621Q6ZSS3 439 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ASPGQ86U10 573 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 FAM20CQ8IXL6 584 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ARL14Q8N4G2 192 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 TRIML2Q8N7C3 387 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF511Q8NB15 262 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CAMKVQ8NCB2 501 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF548Q8NEK5 533 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 OR2L5Q8NG80 312 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 NT5CQ8TCD5 201 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CREB3L4Q8TEY5 395 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 NUDT8Q8WV74 236 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 EDAQ92838 391 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 POP5Q969H6 163 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 GAL3ST3Q96A11 431 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 FAM120BQ96EK7 910 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF764Q96H86 408 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CCDC115Q96NT0 180 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 KCNC2Q96PR1 638 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 TBCDQ9BTW9 1192 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 FAIM2Q9BWQ8 316 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ROGDIQ9GZN7 287 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 RAD21L1Q9H4I0 556 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 DDX31Q9H8H2 851 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ERVMER34-1Q9H9K5 563 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 COPS7BQ9H9Q2 264 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 SERHLQ9NQF3 203 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 PRMT8Q9NR22 394 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 VAPAQ9P0L0 249 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 C6orf203Q9P0P8 240 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF282Q9UDV7 671 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
SF3A3-206ENST00000487062 VPS4AQ9UN37 437 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 PCDHB14Q9Y5E9 798 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 KLK4Q9Y5K2 254 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 CSNK1G3Q9Y6M4 447 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM131Q92545 1883 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 XIRP2A4UGR9 3374 aa6.72□□□□□ -1.33
SF3A3-206ENST00000487062 TCRBV3S1A0A5B6 114 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 ELOVL7A1L3X0 281 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 FAM220BPB1ANY3 271 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 CLIC1O00299 241 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 RTCAO00442 366 aaKnown RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 ARPC2O15144 300 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 YY2O15391 372 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 SCN2BO60939 215 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PIAS2O75928 621 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 UBXN7O94888 489 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 TBX6O95947 436 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 GBAP04062 536 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 GPIP06744 558 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PROS1P07225 676 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 FAM58BPP0C7Q3 252 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PIM1P11309 404 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 DRD2P14416 443 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 DDCP20711 480 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 CDH3P22223 829 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 IL10P22301 178 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PSMA4P25789 261 aaKnown RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 SLC7A1P30825 629 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PTDSS1P48651 473 aaKnown RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 ALDH9A1P49189 494 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 ARRB1P49407 418 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PPM1FP49593 454 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 PLA2G16P53816 162 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 ATXN3P54252 364 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 MAZP56270 477 aaKnown RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 WNT3P56703 355 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 MTPNP58546 118 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 DMWDQ09019 674 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 MANEAQ5SRI9 462 aa6.71□□□□□ -1.34
SF3A3-206ENST00000487062 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.71□□□□□ -1.34
SF3A3-206ENST00000487062 GLYATQ6IB77 296 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms