RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 TOR1AIP1Q5JTV8 583 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 C8orf74Q6P047 294 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 SLC5A8Q8N695 610 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 SUN3Q8TAQ9 357 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 STAG3L4Q8TBR4 150 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 ELP5Q8TE02 316 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 NR4A3Q92570 626 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 MS4A6EQ96DS6 147 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 TAAR6Q96RI8 345 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 EFCAB11Q9BUY7 163 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 NPLQ9BXD5 320 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 UNKQ9C0B0 810 aaKnown RBP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 KCNK13Q9HB14 408 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 ABI3Q9P2A4 366 aa13.53□□□□□ -0.24
CLDN11-207ENST00000486975 PLEKHB1Q9UF11 243 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-207ENST00000486975 SCN3AQ9NY46 2000 aa13.52□□□□□ -0.24
CLDN11-207ENST00000486975 A0A088AWK7 358 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 LRIT2A6NDA9 550 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 A8MUI8 341 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PSMD12O00232 456 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-207ENST00000486975 CLGNO14967 610 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 ST8SIA5O15466 376 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PRAMEF4O60810 478 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 B4GALT2O60909 372 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 ZNF10P21506 573 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-207ENST00000486975 HNF4AP41235 474 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 CASP2P42575 452 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 HSPA7P48741 367 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 TDGF1P3P51864 188 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 ACTN3Q08043 901 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PCDH1Q08174 1060 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 TERF2Q15554 542 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 TBCCQ15814 346 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PDK4Q16654 411 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 MEP1AQ16819 746 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PRAMEF9Q5VWM5 478 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 LRRC70Q7Z2Q7 622 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 VN1R5Q7Z5H4 357 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 TBC1D1Q86TI0 1168 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-207ENST00000486975 ISCA2Q86U28 154 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 CRLF3Q8IUI8 442 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 CA13Q8N1Q1 262 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 AMER2Q8N7J2 671 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 OR2L5Q8NG80 312 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 DNAJB8Q8NHS0 232 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 ADAMTS18Q8TE60 1221 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 UBTD2Q8WUN7 234 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PTCD3Q96EY7 689 aaKnown RBP13.52□□□□□ -0.25
CLDN11-207ENST00000486975 C5orf34Q96MH7 638 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 PTCHD1Q96NR3 888 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 ATOH8Q96SQ7 321 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 CD244Q9BZW8 370 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 RHBGQ9H310 441 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 NMRAL1Q9HBL8 299 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 NUDT4Q9NZJ9 180 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 CD274Q9NZQ7 290 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 RNF112Q9ULX5 631 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 MMACHCQ9Y4U1 282 aa13.52□□□□□ -0.25
CLDN11-207ENST00000486975 SCN2AQ99250 2005 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 SYNDIG1LA6NDD5 238 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 ANKDD1BA6NHY2 528 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 KERAO60938 352 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 FAM155BO75949 473 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 TBX6O95947 436 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 CRYABP02511 175 aaKnown RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 S100BP04271 92 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 EPORP19235 508 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 TFEBP19484 476 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 HNRNPH1P31943 449 aaKnown RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 TAS2R50P59544 299 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 DLG1Q12959 904 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 LAPTM5Q13571 262 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 DOC2AQ14183 400 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 C4orf17Q53FE4 359 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 PAGE2BQ5JRK9 111 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 CEP128Q6ZU80 1094 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 RAPH1Q70E73 1250 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 CMC1Q7Z7K0 106 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 RELL1Q8IUW5 271 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 BEST3Q8N1M1 668 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 ARMC10Q8N2F6 343 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 MDS2Q8NDY4 140 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 ARMC2Q8NEN0 867 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 ZNF775Q96BV0 537 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 FAR2Q96K12 515 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 QRFPRQ96P65 431 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 NPAS2Q99743 824 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 USB1Q9BQ65 265 aaKnown RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 ALG9Q9H6U8 611 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 IGSF5Q9NSI5 407 aa13.51□□□□□ -0.25
CLDN11-207ENST00000486975 ZNF490Q9ULM2 529 aaPredicted RBP13.51□□□□□ -0.25
CLDN11-207ENST00000486975 UNC79Q9P2D8 2635 aa13.5□□□□□ -0.25
CLDN11-207ENST00000486975 ESYT3A0FGR9 886 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms