RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 GAL3ST3Q96A11 431 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 TM4SF19Q96DZ7 209 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
PRKCB-207ENST00000486868 NRTNQ99748 197 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 TPSD1Q9BZJ3 242 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 ABCG4Q9H172 646 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 NEUROD4Q9HD90 331 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 MIEF1Q9NQG6 463 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 PRDM7Q9NQW5 492 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 SLC6A13Q9NSD5 602 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 DCAF13Q9NV06 445 aaKnown RBP11.09□□□□□ -0.63
PRKCB-207ENST00000486868 LYARQ9NX58 379 aaKnown RBP11.09□□□□□ -0.63
PRKCB-207ENST00000486868 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 TAS2R9Q9NYW1 312 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 APOBEC3BQ9UH17 382 aaKnown RBP11.09□□□□□ -0.63
PRKCB-207ENST00000486868 SIT1Q9Y3P8 196 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 DTNAQ9Y4J8 743 aa11.09□□□□□ -0.63
PRKCB-207ENST00000486868 PCM1Q15154 2024 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 A0A1W2PRB8 838 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 LILRA5A6NI73 299 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CREG1O75629 220 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CPSF4O95639 269 aaKnown RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 WNT1P04628 370 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 SMIM10L1P0DMW3 83 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 UGT2B7P16662 529 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 HIST1H1TP22492 207 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 PEX2P28328 305 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 NXPH1P58417 271 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CYP4F2P78329 520 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 TXNL4AP83876 142 aaKnown RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 SLC9A5Q14940 896 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 TEAD4Q15561 434 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 VMACQ2NL98 169 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF385BQ569K4 471 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 WDR45BQ5MNZ6 344 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 INTS11Q5TA45 600 aaKnown RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 TRIM40Q6P9F5 258 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 OGFOD3Q6PK18 319 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 FIGLAQ6QHK4 219 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 SPESP1Q6UW49 350 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 IZUMO2Q6UXV1 221 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ASPGQ86U10 573 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ANKRD46Q86W74 232 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 OOSP2Q86WS3 158 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 SLC30A8Q8IWU4 369 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 KBTBD2Q8IY47 623 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CAMKVQ8NCB2 501 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ICA1LQ8NDH6 482 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 OR52N2Q8NGI0 321 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CDC26Q8NHZ8 85 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ZDHHC1Q8WTX9 485 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 SMIM10Q96HG1 83 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 RNF145Q96MT1 663 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 LRRC61Q9BV99 259 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 CHST8Q9H2A9 424 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 TCEAL2Q9H3H9 227 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ERVMER34-1Q9H9K5 563 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 TM9SF3Q9HD45 589 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 AGPAT4Q9NRZ5 378 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 PILRAQ9UKJ1 303 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 RAB26Q9ULW5 256 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 ERVK-11Q9UQG0 969 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 DOCK9Q9BZ29 2069 aa11.08□□□□□ -0.64
PRKCB-207ENST00000486868 A0A0J9YY10 115 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 OR6C74A6NCV1 312 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 OR5K3A6NET4 321 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 SAP18O00422 153 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 SCAMP1O15126 338 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ZSCAN9O15535 394 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 MAP3K13O43283 966 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 SH3BGRLO75368 114 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 PRSS23O95084 383 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 KCNK5O95279 499 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF26P17031 533 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ZNF10P21506 573 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 UQCRC2P22695 453 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ATP5A1P25705 553 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 SSR2P43308 183 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ATXN3P54252 364 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 PCBP4P57723 403 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 PLIN5Q00G26 463 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 RPL6Q02878 288 aaKnown RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 HHEXQ03014 270 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 CHRNB3Q05901 458 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 RGNQ15493 299 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 ATP6AP1Q15904 470 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 MPEG1Q2M385 716 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 GRAMD1BQ3KR37 738 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 LPCAT4Q643R3 524 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 PPP4R4Q6NUP7 873 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 IRGCQ6NXR0 463 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 FBXO42Q6P3S6 717 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 DNAJC14Q6Y2X3 702 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-207ENST00000486868 RNF44Q7L0R7 432 aa11.07□□□□□ -0.64
PRKCB-207ENST00000486868 VN1R4Q7Z5H5 301 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms