RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 METTL6Q8TCB7 284 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 TWIST2Q8WVJ9 160 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 WDR34Q96EX3 536 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 PTCD3Q96EY7 689 aaKnown RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 MAELQ96JY0 434 aaKnown RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 CDK15Q96Q40 435 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 EFCAB11Q9BUY7 163 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 SLC26A1Q9H2B4 701 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 WDR54Q9H977 334 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 MEAF6Q9HAF1 191 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 NXT1Q9UKK6 140 aaKnown RBP16.19■□□□□ 0.18
VIM-205ENST00000485947 FIS1Q9Y3D6 152 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 DNAJC15Q9Y5T4 150 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 TEX15Q9BXT5 2789 aa16.19■□□□□ 0.18
VIM-205ENST00000485947 A0A1W2PPV9 198 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 OR2A25A4D2G3 310 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 DSCR3O14972 297 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 DIAPH2O60879 1101 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 SKAP2O75563 359 aaPredicted RBP16.18■□□□□ 0.18
VIM-205ENST00000485947 DCTN3O75935 186 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 WFS1O76024 890 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 HRH2P25021 359 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 FOLR3P41439 243 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 IDH3AP50213 366 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 FOXA1P55317 472 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 BTKQ06187 659 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 LAPTM5Q13571 262 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 XKR6Q5GH73 641 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 ATG9BQ674R7 924 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 GRHL2Q6ISB3 625 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 ASB18Q6ZVZ8 466 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 ACAD11Q709F0 780 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 C17orf64Q86WR6 236 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 SLC5A11Q8WWX8 675 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 NEIL2Q969S2 332 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 VPS50Q96JG6 964 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 KCNA7Q96RP8 456 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 CCDC28BQ9BUN5 200 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 SLC25A23Q9BV35 468 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 NUF2Q9BZD4 464 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 PELI2Q9HAT8 420 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 ZNF71Q9NQZ8 489 aaPredicted RBP16.18■□□□□ 0.18
VIM-205ENST00000485947 SNX6Q9UNH7 406 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 TP53TG5Q9Y2B4 290 aa16.18■□□□□ 0.18
VIM-205ENST00000485947 UBR5O95071 2799 aaPredicted RBP16.18■□□□□ 0.18
VIM-205ENST00000485947 KCNE1BA0A087WTH5 132 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 TXNDC9O14530 226 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 VPS4BO75351 444 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 KRT6AP02538 564 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 KRT6BP04259 564 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 C1GALT1C1LP0DN25 315 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 KRT6CP48668 564 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 PGDP52209 483 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 PRDX1Q06830 199 aaKnown RBP16.17■□□□□ 0.18
VIM-205ENST00000485947 SF3A3Q12874 501 aaKnown RBP eCLIP16.17■□□□□ 0.18
VIM-205ENST00000485947 DOC2AQ14183 400 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 PAGE2BQ5JRK9 111 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 C10orf62Q5T681 223 aaPredicted RBP16.17■□□□□ 0.18
VIM-205ENST00000485947 MLIPQ5VWP3 458 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 PRMT9Q6P2P2 845 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 SLCO4C1Q6ZQN7 724 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 RNF44Q7L0R7 432 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 TMPRSS11BQ86T26 416 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 C2orf73Q8N5S3 287 aaPredicted RBP16.17■□□□□ 0.18
VIM-205ENST00000485947 TEX19Q8NA77 164 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 C19orf60Q96EN9 201 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 ZFYVE21Q9BQ24 234 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 CUTCQ9NTM9 273 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 ABCF3Q9NUQ8 709 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 DHCR7Q9UBM7 475 aaKnown RBP16.17■□□□□ 0.18
VIM-205ENST00000485947 TAC3Q9UHF0 121 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 RNF11Q9Y3C5 154 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 ZNF451Q9Y4E5 1061 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 TIMM22Q9Y584 194 aa16.17■□□□□ 0.18
VIM-205ENST00000485947 SERTM1A2A2V5 107 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 ARGFXA6NJG6 315 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 H0YIV9 168 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 PEX12O00623 359 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 SDHDO14521 159 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 PIP5K1BO14986 540 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 PRAMEF4O60810 478 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 ALAS2P22557 587 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 TLE1Q04724 770 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
VIM-205ENST00000485947 SLC9B1Q4ZJI4 515 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 PRAMEF9Q5VWM5 478 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 METTL21CQ5VZV1 264 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 ICE2Q659A1 982 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 NXPE4Q6UWF7 544 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 TTLL10Q6ZVT0 673 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 OVCH1Q7RTY7 1134 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 PTRH1Q86Y79 214 aaKnown RBP16.16■□□□□ 0.18
VIM-205ENST00000485947 MYLK4Q86YV6 388 aaPredicted RBP16.16■□□□□ 0.18
VIM-205ENST00000485947 FAM20CQ8IXL6 584 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 CEP70Q8NHQ1 597 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 ACTRT2Q8TDY3 377 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 CCT6BQ92526 530 aa16.16■□□□□ 0.18
VIM-205ENST00000485947 REPS1Q96D71 796 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms