RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 EGFL8Q99944 293 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 GRPEL1Q9HAV7 217 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 PRDM9Q9NQV7 894 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 ZNF223Q9UK11 482 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-221ENST00000483778 OARD1Q9Y530 152 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 KCNE2Q9Y6J6 123 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 OTOGQ6ZRI0 2925 aa16.85■□□□□ 0.29
ATG4B-221ENST00000483778 NCF1BA6NI72 391 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 SAGE2PA6NJ88 616 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 NCF1CA8MVU1 366 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 C19orf84I3L1E1 186 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 WDR47O94967 919 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 SLC6A12P48065 614 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 TAS2R50P59544 299 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 GNG11P61952 73 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 CDKL1Q00532 357 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 C3P1Q6ZMU1 363 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 C16orf47Q6ZP98 133 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 Q6ZPB1 254 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 ZNF808Q8N4W9 903 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 APCDD1LQ8NCL9 501 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 SREK1Q8WXA9 508 aaKnown RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 ANKRD7Q92527 254 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 QRFPRQ96P65 431 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 SUCOQ9UBS9 1254 aaKnown RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 CTNNAL1Q9UBT7 734 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 ZNF490Q9ULM2 529 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-221ENST00000483778 POLQO75417 2590 aa16.84■□□□□ 0.29
ATG4B-221ENST00000483778 LRIT2A6NDA9 550 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 EFCAB8A8MWE9 144 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 PRKNO60260 465 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 NME2P1O60361 137 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 SLC25A12O75746 678 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 NME2P22392 152 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 SSTR1P30872 391 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 RFC3P40938 356 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 KCNC1P48547 511 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 RBPJQ06330 500 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 SLBPQ14493 270 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 ZNF630Q2M218 657 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 KRTCAP3Q53RY4 240 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 BNC2Q6ZN30 1099 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 KLHDC8AQ8IYD2 350 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 LGI4Q8N135 537 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 TMEM178AQ8NBL3 297 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 MS4A6EQ96DS6 147 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 VPS39Q96JC1 886 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 PDLIM2Q96JY6 352 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 PHF12Q96QT6 1004 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 KRT12Q99456 494 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 TMEM79Q9BSE2 394 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 RHOJQ9H4E5 214 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 TRIM45Q9H8W5 580 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 LIN28AQ9H9Z2 209 aaKnown RBP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 HRH3Q9Y5N1 445 aa16.83■□□□□ 0.28
ATG4B-221ENST00000483778 KLF2Q9Y5W3 355 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-221ENST00000483778 ENO4A6NNW6 628 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 ADAM10O14672 748 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
ATG4B-221ENST00000483778 PTGER1P34995 402 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 HLCSP50747 726 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 GPR143P51810 404 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 CBLBQ13191 982 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 OR4D1Q15615 310 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 MDGA2Q7Z553 956 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 DOLPP1Q86YN1 238 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 SCUBE1Q8IWY4 988 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 ZBED8Q8IZ13 594 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 ARMC10Q8N2F6 343 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 CCT6BQ92526 530 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 DEFB126Q9BYW3 111 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 CLK4Q9HAZ1 481 aaKnown RBP16.82■□□□□ 0.28
ATG4B-221ENST00000483778 GPAMQ9HCL2 828 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 PNO1Q9NRX1 252 aaKnown RBP16.82■□□□□ 0.28
ATG4B-221ENST00000483778 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 MEMO1Q9Y316 297 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 ASB1Q9Y576 335 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 SAR1BQ9Y6B6 198 aa16.82■□□□□ 0.28
ATG4B-221ENST00000483778 HCFC1P51610 2035 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 TRBV11-1A0A0K0K1C0 115 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 TMEM200CA6NKL6 621 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 PSMD12O00232 456 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-221ENST00000483778 ERI3O43414 337 aaKnown RBP16.81■□□□□ 0.28
ATG4B-221ENST00000483778 H2AFYO75367 372 aaKnown RBP16.81■□□□□ 0.28
ATG4B-221ENST00000483778 MYO1DO94832 1006 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 C1QAP02745 245 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 GNAZP19086 355 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 CD22P20273 847 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 TRHRP34981 398 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-221ENST00000483778 KIR3DL1P43629 444 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 CYB561P49447 251 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 HNMTP50135 292 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 SKP1P63208 163 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 TGFBIQ15582 683 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 TMIGD1Q6UXZ0 262 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 SULF2Q8IWU5 870 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 ZNF295-AS1Q8N0V1 137 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 MAGED4Q96JG8 741 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms