RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 TJAP1Q5JTD0 557 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 LPCAT4Q643R3 524 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 FCRL6Q6DN72 434 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 FIGLAQ6QHK4 219 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ZNF793Q6ZN11 406 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 VN1R4Q7Z5H5 301 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 AMER3Q8N944 861 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 AVL9Q8NBF6 648 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 SRFBP1Q8NEF9 429 aaKnown RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 OR2L5Q8NG80 312 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ZFP90Q8TF47 636 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 DNAJC9Q8WXX5 260 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 FAM120BQ96EK7 910 aaKnown RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 REXO5Q96IC2 774 aaKnown RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 UCK1Q9HA47 277 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 CD320Q9NPF0 282 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 TAS2R7Q9NYW3 318 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 SPASTQ9UBP0 616 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ZNF282Q9UDV7 671 aaPredicted RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 PRUNE2Q8WUY3 3088 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ABCA7Q8IZY2 2146 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ARHGAP10A1A4S6 786 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 PPM1DO15297 605 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 ZW10O43264 779 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 EPN2O95208 641 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 IL10P22301 178 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 PPIBP23284 216 aaKnown RBP13.37□□□□□ -0.27
CLK3-204ENST00000483723 FRKP42685 505 aaPredicted RBP13.37□□□□□ -0.27
CLK3-204ENST00000483723 FASLGP48023 281 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 POLE2P56282 527 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 HHEXQ03014 270 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 DMWDQ09019 674 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 SLC14A1Q13336 389 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 HEPACAMQ14CZ8 416 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 CPZQ66K79 652 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 OGFOD3Q6PK18 319 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 ZCCHC7Q8N3Z6 543 aaKnown RBP13.37□□□□□ -0.27
CLK3-204ENST00000483723 ADCY4Q8NFM4 1077 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 OR2A5Q96R48 311 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 TBCDQ9BTW9 1192 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 TRIM4Q9C037 500 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 KLHL4Q9C0H6 718 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 VCX3BQ9H321 246 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 TPT1P8Q9HAU6 139 aa13.37□□□□□ -0.27
CLK3-204ENST00000483723 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 C4orf51C9J302 202 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 HNRNPRO43390 633 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 C1QCP02747 245 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 SERPIND1P05546 499 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 SMIM10L1P0DMW3 83 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 DRD2P14416 443 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 MAGP20916 626 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 PSMA4P25789 261 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 PEX2P28328 305 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 LSSP48449 732 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 PLA2G16P53816 162 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 STXBP1P61764 594 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 HBA1P69905 142 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 TRIP10Q15642 601 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 TOR1AIP1Q5JTV8 583 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CWF19L1Q69YN2 538 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 SPESP1Q6UW49 350 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 TRIM73Q86UV7 250 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 MMP21Q8N119 569 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 LRTOMTQ8WZ04 291 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 SMIM10Q96HG1 83 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 KCNC2Q96PR1 638 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 SPATA9Q9BWV2 254 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 MIR1-1HGQ9H1L0 117 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CHST8Q9H2A9 424 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 HRASLS2Q9NWW9 162 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 ASB4Q9Y574 426 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 GSAPA4D1B5 854 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 OR5K3A6NET4 321 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CXCR6O00574 342 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 NOBOXO60393 691 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CTSVO60911 334 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 KCNK5O95279 499 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 RETP07949 1114 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 BMP2P12643 396 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 ACADSP16219 412 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 DDX5P17844 614 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 IL1RNP18510 177 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 EFNA1P20827 205 aaPredicted RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 ATP6V1C1P21283 382 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 HIST1H1TP22492 207 aaPredicted RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 ATP5A1P25705 553 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 PCBP4P57723 403 aaKnown RBP13.36□□□□□ -0.27
CLK3-204ENST00000483723 MAP7Q14244 749 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 TAF11Q15544 211 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 CYP51A1Q16850 503 aa13.36□□□□□ -0.27
CLK3-204ENST00000483723 SWT1Q5T5J6 900 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 277 ms