RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 AMFRQ9UKV5 643 aa5.57□□□□□ -1.52
CSDE1-207ENST00000483407 TTC7AQ9ULT0 858 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-207ENST00000483407 TCAF1Q9Y4C2 921 aa5.57□□□□□ -1.52
CSDE1-207ENST00000483407 KLK4Q9Y5K2 254 aa5.57□□□□□ -1.52
CSDE1-207ENST00000483407 EPN1Q9Y6I3 576 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-207ENST00000483407 PIKFYVEQ9Y2I7 2098 aa5.57□□□□□ -1.52
CSDE1-207ENST00000483407 LOC105369274A0A096LPK9 316 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 IGHV1-45A0A0A0MS14 117 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 LOC102723532A0A0G2JNH3 316 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 A0A1W2PQ72 361 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 OR2A25A4D2G3 310 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 GRID2IPA4D2P6 1211 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF839A8K0R7 811 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 H0YGG7 62 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 TXNDC9O14530 226 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PFDN6O15212 129 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 NDUFS3O75489 264 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 SUN1O94901 812 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 UNC5CO95185 931 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 CCNDBP1O95273 360 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 C1orf105O95561 183 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 MLYCDO95822 493 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 IFNB1P01574 187 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PF4V1P10720 104 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PKMP14618 531 aaKnown RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PSMB5P28074 263 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 HTR1EP28566 365 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 CA7P43166 264 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 BDKRB1P46663 353 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 SMSP52788 366 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 MANFP55145 182 aaKnown RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 EIF3BP55884 814 aaKnown RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ARF3P61204 181 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 EEF1A2Q05639 463 aaKnown RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 DBPQ10586 325 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 SEMA3AQ14563 771 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 NDUFA9Q16795 377 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF630Q2M218 657 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PRTGQ2VWP7 1150 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PCID2Q5JVF3 399 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 GARNL3Q5VVW2 1013 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 FAAH2Q6GMR7 532 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 HIBCHQ6NVY1 386 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 XKRXQ6PP77 449 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF534Q76KX8 674 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 KIAA1328Q86T90 577 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 LDB1Q86U70 411 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 CILP2Q8IUL8 1156 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 OR4N4Q8N0Y3 316 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 TXLNBQ8N3L3 684 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 MPP5Q8N3R9 675 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 OTUD6BQ8N6M0 293 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 CSNK1A1LQ8N752 337 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 OR2A1Q8NGT9 310 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 METTL21AQ8WXB1 218 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 PSMF1Q92530 271 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 RERGQ96A58 199 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 MMABQ96EY8 250 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 C10orf90Q96M02 699 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF778Q96MU6 729 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 TAAR6Q96RI8 345 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 DPH7Q9BTV6 452 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 TUBB6Q9BUF5 446 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ACAT2Q9BWD1 397 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 FRMD8P1Q9BZ68 369 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 DRC3Q9H069 523 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 RNF32Q9H0A6 362 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 MRPS30Q9NP92 439 aaKnown RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 FAM114A2Q9NRY5 505 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 SH3BGRL2Q9UJC5 107 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF148Q9UQR1 794 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 R3HDM2Q9Y2K5 976 aaKnown RBP5.56□□□□□ -1.52
CSDE1-207ENST00000483407 NFS1Q9Y697 457 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 DUSP10Q9Y6W6 482 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
CSDE1-207ENST00000483407 LOC102723996A0A087X1L8 192 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 OR5H15A6NDH6 313 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 H3BMM5 538 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 AP3B1O00203 1094 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 CD3EAPO15446 510 aaKnown RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 SLC19A2O60779 497 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 PRAMEF2O60811 474 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 WDPCPO95876 746 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 F10P00742 488 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 APRTP07741 180 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 CYC1P08574 325 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 C8orf89P0DMQ9 161 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 AGAP20933 346 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 RPS3P23396 243 aaKnown RBP eCLIP5.55□□□□□ -1.525e-6■□□□□ 11.1
CSDE1-207ENST00000483407 ATP5DP30049 168 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 RPA3P35244 121 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 HSD17B2P37059 387 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 SLC26A3P40879 764 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 GRIA1P42261 906 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 MTNR1BP49286 362 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 SESN2P58004 480 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-207ENST00000483407 PRR5P85299 388 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 ZNF33BQ06732 778 aa5.55□□□□□ -1.52
CSDE1-207ENST00000483407 KIF5AQ12840 1032 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms