RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 GDPD4Q6W3E5 623 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 RPS27LQ71UM5 84 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 PXKQ7Z7A4 578 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 LYSMD2Q8IV50 215 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SLC15A3Q8IY34 581 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TBC1D21Q8IYX1 336 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 CDYL2Q8N8U2 506 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 MRPL43Q8N983 215 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 OR52E4Q8NGH9 312 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 MCOLN3Q8TDD5 553 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 BRIX1Q8TDN6 353 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 SH3RF2Q8TEC5 729 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 ATL1Q8WXF7 558 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 STARD8Q92502 1023 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TRIM43Q96BQ3 446 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 RHBDF1Q96CC6 855 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 ZNF597Q96LX8 424 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 RAD9AQ99638 391 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 KCTD14Q9BQ13 255 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 HAUS8Q9BT25 410 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 ZSCAN5AQ9BUG6 496 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 C9orf16Q9BUW7 83 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SLC46A2Q9BY10 475 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 MTIF3Q9H2K0 278 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 EBF3Q9H4W6 596 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SLC32A1Q9H598 525 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 COPS7BQ9H9Q2 264 aaPredicted RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 PARVBQ9HBI1 364 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 FBRSL1Q9HCM7 1045 aaKnown RBP7.44□□□□□ -1.22
SNX13-208ENST00000482558 SLC52A3Q9NQ40 469 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PRDM8Q9NQV8 689 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 FBLN5Q9UBX5 448 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 PRSS50Q9UI38 385 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 SNX6Q9UNH7 406 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 X6R8D5 127 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 OBSL1O75147 1896 aa7.44□□□□□ -1.22
SNX13-208ENST00000482558 DHRS12A0PJE2 317 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PTGES3LE9PB15 166 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 K7ERQ8 282 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TXNDC9O14530 226 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 LSM1O15116 133 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 VILLO15195 856 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 RSL1D1O76021 490 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 SORBS2O94875 1100 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 CLDN9O95484 217 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 CLEC3BP05452 202 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 RB1P06400 928 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 FAM58BPP0C7Q3 252 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ATP1B2P14415 290 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 PSMC3P17980 439 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PI3P19957 117 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TCN1P20061 433 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 VIPR1P32241 457 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 GJA4P35212 333 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 BMPR1AP36894 532 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ARL1P40616 181 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 RPL5P46777 297 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 SPINT3P49223 89 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 AGTR2P50052 363 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 CCNHP51946 323 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 RAD23AP54725 363 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ERVPABLB-1P60509 514 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ZXDBP98169 803 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PLOD1Q02809 727 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 MGAT2Q10469 447 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TRAF3Q13114 568 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TBCEQ15813 527 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 IMPG1Q17R60 797 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 AP5B1Q2VPB7 878 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 C6orf10Q5SRN2 563 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 LDLRAP1Q5SW96 308 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TMTC4Q5T4D3 741 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 LRRC66Q68CR7 880 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PSRC1Q6PGN9 363 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 FBXO46Q6PJ61 603 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 CYP20A1Q6UW02 462 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 Q6ZSR9 355 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TRAM1L1Q8N609 369 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PAPD5Q8NDF8 572 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 TRPV3Q8NET8 790 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 OR4F6Q8NGB9 312 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 OR9I1Q8NGQ6 314 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 WFDC5Q8TCV5 224 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 OSCP1Q8WVF1 389 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ASZ1Q8WWH4 475 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TMEM125Q96AQ2 219 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PPWD1Q96BP3 646 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 CENPNQ96H22 339 aaPredicted RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 KLHL32Q96NJ5 620 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 CCDC115Q96NT0 180 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 KCNA7Q96RP8 456 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 PKP2Q99959 881 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 TCF25Q9BQ70 676 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 BBS2Q9BXC9 721 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 MRPS26Q9BYN8 205 aaKnown RBP7.43□□□□□ -1.22
SNX13-208ENST00000482558 FAM83DQ9H4H8 585 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 EPHX3Q9H6B9 360 aa7.43□□□□□ -1.22
SNX13-208ENST00000482558 ZNF696Q9H7X3 374 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms