RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CHDHQ8NE62 594 aaPredicted RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 HMGB4Q8WW32 186 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 HSPBAP1Q96EW2 488 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 APOOQ9BUR5 198 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 BTBD1Q9H0C5 482 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 TDRD6O60522 2096 aaKnown RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 IGKV1-8A0A0C4DH67 115 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 TCRBV21S2A2A0A5A6 115 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 SCAMP2O15127 329 aaKnown RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 SERPINA1P01009 418 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 KELP23276 732 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 TIA1P31483 386 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHD3-211ENST00000481999 DCTP40126 519 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 GZMMP51124 257 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 NFATC3Q12968 1075 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 MTAPQ13126 283 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 MPEG1Q2M385 716 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 RFX4Q33E94 735 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 ZNF829Q3KNS6 432 aaPredicted RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 ADCK2Q7Z695 626 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 FAM129CQ86XR2 697 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 HIPK1Q86Z02 1210 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 TBC1D15Q8TC07 691 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 BORCS5Q969J3 196 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 MAL2Q969L2 176 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 REXO5Q96IC2 774 aaKnown RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 GAS2L1Q99501 681 aaPredicted RBP13.83□□□□□ -0.2
CHD3-211ENST00000481999 SYNPO2LQ9H987 977 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 BRF2Q9HAW0 419 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 SLCO1B1Q9Y6L6 691 aa13.83□□□□□ -0.2
CHD3-211ENST00000481999 NPIPB8E9PQR5 432 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 LCMT2O60294 686 aaKnown RBP13.82□□□□□ -0.2
CHD3-211ENST00000481999 IL7RP16871 459 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 ENGP17813 658 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 PIGAP37287 484 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 TPMTP51580 245 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 VAC14Q08AM6 782 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 ABHD18Q0P651 414 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 LAS2Q8IYD9 372 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 SPARTQ8N0X7 666 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 AMER3Q8N944 861 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 SNX19Q92543 992 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 UCN3Q969E3 161 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 PPP1R14BQ96C90 147 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 F2RL3Q96RI0 385 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 EFCAB11Q9BUY7 163 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 DUSP26Q9BV47 211 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 TBC1D23Q9NUY8 699 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 ACSL6Q9UKU0 697 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 ORC6Q9Y5N6 252 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 SERTM1A2A2V5 107 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 WASHC1A8K0Z3 465 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 PI15O43692 258 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 HS6ST1O60243 411 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 IDSP22304 550 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 RAD23AP54725 363 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 TAS2R50P59544 299 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 AGERQ15109 404 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 ZC3H12BQ5HYM0 836 aaKnown RBP13.82□□□□□ -0.2
CHD3-211ENST00000481999 ENPP7Q6UWV6 458 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 WASH2PQ6VEQ5 465 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 MSANTD1Q6ZTZ1 278 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 OR1E3Q8WZA6 343 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 PYURFQ96I23 114 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 TRIT1Q9H3H1 467 aaKnown RBP13.82□□□□□ -0.2
CHD3-211ENST00000481999 LTB4R2Q9NPC1 389 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 TBC1D29Q9UFV1 150 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
CHD3-211ENST00000481999 SCN3AQ9NY46 2000 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 LOC100130705A0A1B0GUX0 176 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 CLIC1O00299 241 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 SERPIND1P05546 499 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 ACADMP11310 421 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 CD247P20963 164 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 AQP1P29972 269 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 MAPK9P45984 424 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 HNRNPFP52597 415 aaKnown RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 PCDH1Q08174 1060 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 CD47Q08722 323 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 RPA4Q13156 261 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 IL18R1Q13478 541 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 MOGQ16653 247 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 MEP1AQ16819 746 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 C17orf64Q86WR6 236 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 ARL10Q8N8L6 244 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 OR5AK3PQ8NH89 298 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 NELL1Q92832 810 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 WDR34Q96EX3 536 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 LHPPQ9H008 270 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 GPN2Q9H9Y4 310 aaPredicted RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 SPHK1Q9NYA1 384 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 PSME2Q9UL46 239 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 MDC1Q14676 2089 aaKnown RBP13.81□□□□□ -0.2
CHD3-211ENST00000481999 COL4A2P08572 1712 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 PLPP1O14494 284 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 ACPPP15309 386 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 DUOXA1Q1HG43 343 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 ZNF542PQ5EBM4 170 aa13.81□□□□□ -0.2
CHD3-211ENST00000481999 CPTPQ5TA50 214 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms