RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 ZFATQ9P243 1243 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 KCNN3Q9UGI6 736 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 HRNRQ86YZ3 2850 aaPredicted RBP11.91□□□□□ -0.5
TDP2-204ENST00000478507 TRBV11-1A0A0K0K1C0 115 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 PINLYPA6NC86 204 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 PRKNO60260 465 aaPredicted RBP11.9□□□□□ -0.5
TDP2-204ENST00000478507 CDC40O60508 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
TDP2-204ENST00000478507 KRT14P02533 472 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 DNAJA1P31689 397 aaKnown RBP11.9□□□□□ -0.5
TDP2-204ENST00000478507 CXCR5P32302 372 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 CLCN2P51788 898 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 NUP107P57740 925 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 GPR85P60893 370 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 RAB8AP61006 207 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 ZNF662Q6ZS27 426 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 CCDC71Q8IV32 467 aaPredicted RBP11.9□□□□□ -0.5
TDP2-204ENST00000478507 CNTN4Q8IWV2 1026 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 CA13Q8N1Q1 262 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 NAT8LQ8N9F0 302 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.9□□□□□ -0.5
TDP2-204ENST00000478507 CREB3L4Q8TEY5 395 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 SLC5A11Q8WWX8 675 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 NRGNQ92686 78 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 LINGO1Q96FE5 620 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 KLHL31Q9H511 634 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 IARS2Q9NSE4 1012 aaKnown RBP11.9□□□□□ -0.5
TDP2-204ENST00000478507 ARL15Q9NXU5 204 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 MAD1L1Q9Y6D9 718 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 VPS13CQ709C8 3753 aa11.9□□□□□ -0.5
TDP2-204ENST00000478507 ABCA2Q9BZC7 2435 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 FAM221AA4D161 298 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 A8MUA0 341 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PDE9AO76083 593 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 MYO1DO94832 1006 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 TUBB4AP04350 444 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 SERPIND1P05546 499 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
TDP2-204ENST00000478507 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
TDP2-204ENST00000478507 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PPP2R1BP30154 601 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 CDC25BP30305 580 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PGGT1BP53609 377 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PMPCAQ10713 525 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 CSHL1Q14406 222 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 CRYMQ14894 314 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 SBSNQ6UWP8 590 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 GALNT7Q86SF2 657 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PSD4Q8NDX1 1056 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PDLIM2Q96JY6 352 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 PLAC1Q9HBJ0 212 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 KCNJ16Q9NPI9 418 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 KCMF1Q9P0J7 381 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 IKZF3Q9UKT9 509 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 MMACHCQ9Y4U1 282 aa11.89□□□□□ -0.51
TDP2-204ENST00000478507 A0A0G2JMM0 328 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 A0A1W2PPB8 328 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 A0A1W2PRS3 328 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 KIR3DP1A8MWS1 328 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 KLK8O60259 260 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 DIAPH2O60879 1101 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 GLSO94925 669 aaPredicted RBP11.88□□□□□ -0.51
TDP2-204ENST00000478507 IGHG3P01860 377 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 AHSGP02765 367 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 SERPINA6P08185 405 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 ENO2P09104 434 aaPredicted RBP11.88□□□□□ -0.51
TDP2-204ENST00000478507 CCDC175P0C221 793 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 HNF4AP41235 474 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 SSR4P51571 173 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 HNRNPFP52597 415 aaKnown RBP11.88□□□□□ -0.51
TDP2-204ENST00000478507 IST1P53990 364 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 IL2P60568 153 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 CYP1B1Q16678 543 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 GXYLT1Q4G148 440 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 XKR6Q5GH73 641 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 C16orf47Q6ZP98 133 aaPredicted RBP11.88□□□□□ -0.51
TDP2-204ENST00000478507 ACAD11Q709F0 780 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 GAS2L3Q86XJ1 694 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 TBC1D19Q8N5T2 526 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 TMEM156Q8N614 296 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 TMEM52Q8NDY8 209 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 TRPV3Q8NET8 790 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 OR2M7Q8NG81 312 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 NCLNQ969V3 563 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 VMP1Q96GC9 406 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 TSNARE1Q96NA8 513 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 FOXC2Q99958 501 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 ZNF559Q9BR84 538 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 PELI2Q9HAT8 420 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 TIMMDC1Q9NPL8 285 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 PNPLA3Q9NST1 481 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 YARS2Q9Y2Z4 477 aaKnown RBP11.88□□□□□ -0.51
TDP2-204ENST00000478507 FAM215AQ9Y5M1 114 aa11.88□□□□□ -0.51
TDP2-204ENST00000478507 FLNAP21333 2647 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms