RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ANKRD20A4Q4UJ75 823 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ANKRD20A2Q5SQ80 823 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ANKRD20A1Q5TYW2 823 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ANKRD20A3Q5VUR7 823 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ITPRIPL1Q6GPH6 555 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ALKBH5Q6P6C2 394 aaKnown RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 BHLHB9Q6PI77 547 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 RTL4Q6ZR62 310 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 FAM47EQ6ZV65 393 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 PLEKHM3Q6ZWE6 761 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF534Q76KX8 674 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 OTOAQ7RTW8 1153 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ADCK2Q7Z695 626 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 LRRC56Q8IYG6 542 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 AFAP1L2Q8N4X5 818 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 GOLM1Q8NBJ4 401 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 OR13J1Q8NGT2 312 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 MBD3L2Q8NHZ7 208 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ZCCHC10Q8TBK6 192 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SKA2Q8WVK7 121 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 NTNG2Q96CW9 530 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 THAP11Q96EK4 314 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 PIK3IP1Q96FE7 263 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SGCZQ96LD1 299 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 WFIKKN1Q96NZ8 548 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 HS3ST6Q96QI5 342 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 RASL10BQ96S79 203 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 EBNA1BP2Q99848 306 aaKnown RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 PIGQQ9BRB3 760 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 NECTIN3Q9NQS3 549 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SACM1LQ9NTJ5 587 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 NENFQ9UMX5 172 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ATG4BQ9Y4P1 393 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 BZW2Q9Y6E2 419 aaKnown RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SNPHO15079 494 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 LCMT2O60294 686 aaKnown RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 GALR3O60755 368 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF354AO60765 605 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 TMCC2O75069 709 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 MYO1DO94832 1006 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 SLC16A8O95907 504 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 GOT2P00505 430 aaKnown RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CCL3P10147 92 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CRYGSP22914 178 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 HSD17B2P37059 387 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 PIGAP37287 484 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 PNLIPRP1P54315 467 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 RPS15AP62244 130 aaKnown RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 OLR1P78380 273 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CRYZQ08257 329 aaKnown RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 FOXF2Q12947 444 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 TSTA3Q13630 321 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 VEZF1Q14119 521 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 POU6F1Q14863 301 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 HERC3Q15034 1050 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 TMED2Q15363 201 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 ADGRD1Q6QNK2 874 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 SLC26A11Q86WA9 606 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 LRRC25Q8N386 305 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CAMKVQ8NCB2 501 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 PPFIBP2Q8ND30 876 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 OR6P1Q8NGX9 317 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 GSDMBQ8TAX9 411 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF480Q8WV37 535 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 SLC13A3Q8WWT9 602 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 NCLNQ969V3 563 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 HSPBAP1Q96EW2 488 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 ZBED6CLQ96FA7 236 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 VMP1Q96GC9 406 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 FOPNLQ96NB1 174 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 PKP4Q99569 1192 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 TTC1Q99614 292 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 BEX2Q9BXY8 128 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 PRDM14Q9GZV8 571 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 SLC6A15Q9H2J7 730 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CXorf56Q9H5V9 222 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF703Q9H7S9 590 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CALHM2Q9HA72 323 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 SH2D2AQ9NP31 389 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 PRDM9Q9NQV7 894 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 TMEM184CQ9NVA4 438 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 TMEM160Q9NX00 188 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 CLDN16Q9Y5I7 305 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 USF3Q68DE3 2245 aa6.73□□□□□ -1.33
SPTLC1-205ENST00000477888 A8MXE2 369 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 WWP2O00308 870 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PRMT5O14744 637 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 KPNA5O15131 536 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 NDUFB5O43674 189 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 ERN1O75460 977 aaKnown RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 B3GALT4O96024 378 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 H2AFZP0C0S5 128 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 EGR1P18146 543 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 HRH2P25021 359 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 CFPP27918 469 aa6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 COILP38432 576 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1-205ENST00000477888 PCYT1AP49585 367 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms