RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ARID1AO14497 2285 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CSPG4Q6UVK1 2322 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ATRQ13535 2644 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 A0A0J9YY10 115 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 C17orf113A0A1B0GUU1 675 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 A0A1W2PR48 441 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SLC5A10A0PJK1 596 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 UNC119BA6NIH7 251 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 VSTM2BA6NLU5 285 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 C2orf74A8MZ97 194 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 PEX12O00623 359 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CST8O60676 142 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CTSVO60911 334 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 F10P00742 488 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ALPPP05187 535 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 HBQ1P09105 142 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 H2AFZP0C0S5 128 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 TNNT1P13805 278 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ATP1B2P14415 290 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 MAGP20916 626 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AGXTP21549 392 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 HTR1EP28566 365 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 GRIA3P42263 894 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 OR1D4P47884 311 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CD151P48509 253 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 PHC1P78364 1004 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ZBED6P86452 979 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 PMP22Q01453 160 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CDC16Q13042 620 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SPARCL1Q14515 664 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 KRT33BQ14525 404 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 TAF1AQ15573 450 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SLC18A3Q16572 532 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CYP2A13Q16696 494 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF630Q2M218 657 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AGAP7PQ5VUJ5 663 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ZDHHC20Q5W0Z9 365 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 B3GNTL1Q67FW5 361 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CCDC70Q6NSX1 233 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 RPUSD3Q6P087 351 aaKnown RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SARM1Q6SZW1 724 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 H2AFVQ71UI9 128 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 PID1Q7Z2X4 250 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SERPINA9Q86WD7 417 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 KLHDC8BQ8IXV7 354 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AFAP1L2Q8N4X5 818 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 C2orf73Q8N5S3 287 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 METTL27Q8N6F8 245 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ACBD4Q8NC06 268 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 OR1N1Q8NGS0 311 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 OR2W6PQ8NHA6 318 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 LKAAEAR1Q8TD35 194 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ADAMTS18Q8TE60 1221 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 TFB1MQ8WVM0 346 aaKnown RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 LINC00476Q8WZB0 136 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 NR4A3Q92570 626 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 C8orf44Q96CB5 159 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 HAUS1Q96CS2 278 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 MOCOSQ96EN8 888 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 THOC3Q96J01 351 aaKnown RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 DNAJC1Q96KC8 554 aaKnown RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF830Q96NB3 372 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF285Q96NJ3 590 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AGAP4Q96P64 663 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 IL17FQ96PD4 163 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 QKIQ96PU8 341 aaKnown RBP eCLIP4.35□□□□□ -1.712e-10■■■■■ 36
CKS1B-207ENST00000477676 TTC1Q99614 292 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CHP1Q99653 195 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 BPIFA3Q9BQP9 254 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CCM2Q9BSQ5 444 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AP1M1Q9BXS5 423 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SLC7A5P2Q9GIP4 190 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 LHPPQ9H008 270 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 GBA3Q9H227 469 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SLC26A1Q9H2B4 701 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 MVB12BQ9H7P6 319 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AGPAT4Q9NRZ5 378 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 HAUS2Q9NVX0 235 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SYBUQ9NX95 663 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 EURLQ9NYK6 297 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 HACD3Q9P035 362 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 ITGB1BP2Q9UKP3 347 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 PKP3Q9Y446 797 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 CHST2Q9Y4C5 530 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 SPEF1Q9Y4P9 236 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 KLF2Q9Y5W3 355 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 HEBP2Q9Y5Z4 205 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 BZW2Q9Y6E2 419 aaKnown RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 EPN1Q9Y6I3 576 aaPredicted RBP4.35□□□□□ -1.71
CKS1B-207ENST00000477676 AP1M2Q9Y6Q5 423 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 MXRA5Q9NR99 2828 aa4.35□□□□□ -1.71
CKS1B-207ENST00000477676 STAB1Q9NY15 2570 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 hCG_1818297A0A087WSY0 165 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 LOC105369274A0A096LPK9 316 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 LOC102723532A0A0G2JNH3 316 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 A0A1B0GUH1 482 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 HEATR9A2RTY3 570 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 KLHL33A6NCF5 533 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 OR51F1A6NGY5 319 aa4.34□□□□□ -1.71
CKS1B-207ENST00000477676 DSCR3O14972 297 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms