RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IQCCQ4KMZ1 466 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 DCUN1D3Q8IWE4 304 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 SLCO4A1Q96BD0 722 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 PHF21AQ96BD5 680 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 TAMM41Q96BW9 452 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 HERC2P3Q9BVR0 1158 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 ABCG2Q9UNQ0 655 aa10.6□□□□□ -0.71
COL27A1-204ENST00000477421 GABRR3A8MPY1 467 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CASKO14936 926 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CLPXO76031 633 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ABLIM3O94929 683 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 TIMP2P16035 220 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CD247P20963 164 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF10P21506 573 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SHMT2P34897 504 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 OLR1P78380 273 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 BTN3A2P78410 334 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 NPRL3Q12980 569 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 EXOC3L2Q2M3D2 409 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 RUNDC3AQ59EK9 446 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 KIAA1161Q6NSJ0 714 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 KLHL35Q6PF15 583 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 PARS2Q7L3T8 475 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 TCEANCQ8N8B7 351 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 GEMIN6Q8WXD5 167 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 HDAC2Q92769 488 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 RGMAQ96B86 450 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 TRMT2BQ96GJ1 504 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 FAM129BQ96TA1 746 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 NTMT1Q9BV86 223 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 YTHDF1Q9BYJ9 559 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 OR51V1Q9H2C8 321 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 KRCC1Q9NPI7 259 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 MSRAQ9UJ68 235 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 OR52A4PA6NMU1 304 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 LATS1O95835 1130 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 LCKP06239 509 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 STSP08842 583 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SLC35G6P0C7Q6 338 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ZDHHC11BP0C7U3 371 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CEBPBP17676 345 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 PFKLP17858 780 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CMPK1P30085 196 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SLC6A11P48066 632 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ACVR1Q04771 509 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ST3GAL4Q11206 333 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 PYDC2Q56P42 97 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 RNASE12Q5GAN4 147 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 MEX3DQ86XN8 651 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 DCP2Q8IU60 420 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CBARPQ8N350 705 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CADM2Q8N3J6 435 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 OR9Q2Q8NGE9 314 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 OR52L1Q8NGH7 329 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF480Q8WV37 535 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 POP5Q969H6 163 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF347Q96SE7 839 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 PTPRZ1P23471 2315 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 GRXCR1A8MXD5 290 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SNPHO15079 494 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 ATE1O95260 518 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 OR12D1P0DN82 309 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CPN2P22792 545 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 BMPR1AP36894 532 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 XKP51811 444 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SLC36A3Q495N2 470 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 TAF8Q7Z7C8 310 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SLC5A8Q8N695 610 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 SIPA1Q96FS4 1042 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 DOHHQ9BU89 302 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 IKZF5Q9H5V7 419 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 DCAF13Q9NV06 445 aaKnown RBP10.59□□□□□ -0.71
COL27A1-204ENST00000477421 CEPT1Q9Y6K0 416 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 LTBP1Q14766 1721 aa10.59□□□□□ -0.71
COL27A1-204ENST00000477421 H0YJX3 145 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 VILLO15195 856 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 MID1O15344 667 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 H1F0P07305 194 aaKnown RBP10.58□□□□□ -0.71
COL27A1-204ENST00000477421 MPC1LP0DKB6 136 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 TPP2P29144 1249 aaPredicted RBP10.58□□□□□ -0.71
COL27A1-204ENST00000477421 CRISP3P54108 245 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 PRR5P85299 388 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 HYAL2Q12891 473 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 ZNF542PQ5EBM4 170 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 ADNP2Q6IQ32 1131 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 CARM1Q86X55 608 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 HMGB4Q8WW32 186 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 CEP295NLQ96MC4 621 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 FCRL4Q96PJ5 515 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 CWH43Q9H720 699 aa10.58□□□□□ -0.71
COL27A1-204ENST00000477421 DNMT3BQ9UBC3 853 aaKnown RBP10.58□□□□□ -0.71
COL27A1-204ENST00000477421 H3BMQ9 156 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 ARNTLO00327 626 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 CA3P07451 260 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 PRG2P13727 222 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 HRH2P25021 359 aa10.58□□□□□ -0.72
COL27A1-204ENST00000477421 PSMB5P28074 263 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms