RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 TRPC4APQ8TEL6 797 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 UBE2E3Q969T4 207 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 ATP6V1E2Q96A05 226 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 GAL3ST3Q96A11 431 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 MTFMTQ96DP5 389 aaKnown RBP9.15□□□□□ -0.94
HDAC3-208ENST00000476739 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 QRFPRQ96P65 431 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 ZIM3Q96PE6 472 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 NTMT1Q9BV86 223 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 TMEM109Q9BVC6 243 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 SORBS1Q9BX66 1292 aaKnown RBP9.15□□□□□ -0.94
HDAC3-208ENST00000476739 ERVK-6Q9BXR3 956 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 MS4A8Q9BY19 250 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 FAM107BQ9H098 131 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 OR51B5Q9H339 312 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 PRDM7Q9NQW5 492 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF71Q9NQZ8 489 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-208ENST00000476739 LANCL2Q9NS86 450 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 SEMA3GQ9NS98 782 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 C14orf105Q9NVL8 296 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 PSD3Q9NYI0 1048 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 FBXL4Q9UKA2 621 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 MKL2Q9ULH7 1088 aa9.15□□□□□ -0.94
HDAC3-208ENST00000476739 ATMQ13315 3056 aa9.15□□□□□ -0.95
HDAC3-208ENST00000476739 IGSF10Q6WRI0 2623 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 IGHV3-20A0A0C4DH32 117 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 URADA6NGE7 173 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 A6NL46 340 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 PEX12O00623 359 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 OR4F21O95013 312 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CLDN9O95484 217 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 HEXBP07686 556 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CERS1P27544 350 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 GSTM2P28161 218 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 HNRNPFP52597 415 aaKnown RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 RPS13P62277 151 aaKnown RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 BTG2P78543 158 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 RHAGQ02094 409 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CLCQ05315 142 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 EEF1A2Q05639 463 aaKnown RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 KRT71Q3SY84 523 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CCDC153Q494R4 210 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 MINDY4Q4G0A6 757 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TCHHL1Q5QJ38 904 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 DCAF10Q5QP82 559 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 BEND6Q5SZJ8 279 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CEP85LQ5SZL2 805 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 MFSD4BQ5TF39 518 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TRIM40Q6P9F5 258 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TMEM205Q6UW68 189 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 MED25Q71SY5 747 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 MILR1Q7Z6M3 343 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 SLC22A9Q8IVM8 553 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TMEM102Q8N9M5 508 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 LSM14AQ8ND56 463 aaKnown RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TMEM52Q8NDY8 209 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 FDCSPQ8NFU4 85 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TSLPQ969D9 159 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 L3HYPDHQ96EM0 354 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 APOPT1Q96IL0 206 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 SEC16BQ96JE7 1060 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CSF3RQ99062 836 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 ZNF717Q9BY31 904 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 GSTO2Q9H4Y5 243 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 DMRT3Q9NQL9 472 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 FARSBQ9NSD9 589 aaKnown RBP9.14□□□□□ -0.95
HDAC3-208ENST00000476739 SLC17A7Q9P2U7 560 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 GRID1Q9ULK0 1009 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 TSC22D4Q9Y3Q8 395 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 DOCK10Q96BY6 2186 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 CHD6Q8TD26 2715 aa9.14□□□□□ -0.95
HDAC3-208ENST00000476739 LOC102723996A0A087X1L8 192 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 PLPP1O14494 284 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 UBFD1O14562 309 aaKnown RBP9.13□□□□□ -0.95
HDAC3-208ENST00000476739 B4GALT2O60909 372 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 CEACAM4O75871 244 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 IGHEP01854 428 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 TUBBP07437 444 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 FHP07954 510 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 CELA2AP08217 269 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 MYL2P10916 166 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 COX6A1P12074 109 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 ATP5A1P25705 553 aaKnown RBP9.13□□□□□ -0.95
HDAC3-208ENST00000476739 PIK3CBP42338 1070 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 LIM2P55344 173 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 PCLAFQ15004 111 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 PCOLCEQ15113 449 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 TUBB8Q3ZCM7 444 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 GGTA1PQ4G0N0 100 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 SGO1Q5FBB7 561 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 COLEC12Q5KU26 742 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 DEPDC1Q5TB30 811 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 KHDRBS2Q5VWX1 349 aaKnown RBP9.13□□□□□ -0.95
HDAC3-208ENST00000476739 CNPY4Q8N129 248 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 ZNF843Q8N446 348 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 CCNYL1Q8N7R7 359 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 ARMC2Q8NEN0 867 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 TCP10LQ8TDR4 215 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 PPP4R1Q8TF05 950 aa9.13□□□□□ -0.95
HDAC3-208ENST00000476739 TBC1D20Q96BZ9 403 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms