RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RAB8AP61006 207 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 RPS13P62277 151 aaKnown RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MAT1AQ00266 395 aaKnown RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 BST1Q10588 318 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 LAPTM5Q13571 262 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 FAM53BQ14153 422 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MAP7Q14244 749 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 RCN2Q14257 317 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SLC9A5Q14940 896 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ABRAXAS2Q15018 415 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CHI3L2Q15782 390 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 RBBP7Q16576 425 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SYT16Q17RD7 645 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 NKAIN1Q4KMZ8 207 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SGO1Q5FBB7 561 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PAGE2BQ5JRK9 111 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MANEAQ5SRI9 462 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 DEPDC1Q5TB30 811 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 TMEM164Q5U3C3 297 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 YOD1Q5VVQ6 348 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 GARNL3Q5VVW2 1013 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 FRG2Q64ET8 278 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CLEC6AQ6EIG7 209 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ABHD17CQ6PCB6 329 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SCIMPQ6UWF3 145 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 C6orf15Q6UXA7 325 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ZNF793Q6ZN11 406 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 VASH2Q86V25 355 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MYLK4Q86YV6 388 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 NUDCD3Q8IVD9 361 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 KRT78Q8N1N4 520 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CAMKVQ8NCB2 501 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 OR5T3Q8NGG3 340 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 OR9A4Q8NGU2 314 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 ZCCHC10Q8TBK6 192 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MGARPQ8TDB4 240 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PPP4R1Q8TF05 950 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CT55Q8WUE5 264 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 RERGQ96A58 199 aaPredicted RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MTFMTQ96DP5 389 aaKnown RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SEC16BQ96JE7 1060 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CNDP1Q96KN2 507 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 FRG2BQ96QU4 278 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MESP1Q9BRJ9 268 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 NDC1Q9BTX1 674 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SORBS1Q9BX66 1292 aaKnown RBP6.62□□□□□ -1.35
LIMD1-204ENST00000474665 DRC3Q9H069 523 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 OR51B5Q9H339 312 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 TUBB1Q9H4B7 451 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MID1IP1Q9NPA3 183 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PRDM7Q9NQW5 492 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CTSFQ9UBX1 484 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 TRPS1Q9UHF7 1281 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PADI1Q9ULC6 663 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PPT2Q9UMR5 302 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 CCL27Q9Y4X3 112 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PCDHGA11Q9Y5H2 935 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 SLC22A7Q9Y694 548 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 MAU2Q9Y6X3 613 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 PCNX1Q96RV3 2341 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 NUP210LQ5VU65 1888 aa6.62□□□□□ -1.35
LIMD1-204ENST00000474665 BSNQ9UPA5 3926 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 IGLV3-12A0A075B6K2 115 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 OR2W5A6NFC9 320 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 VSTM2BA6NLU5 285 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SGK494L7N484 410 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 FOXE1O00358 373 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SAP18O00422 153 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 RTCAO00442 366 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 PLPP1O14494 284 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TXNDC9O14530 226 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 DYNC1I1O14576 645 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SNNO75324 88 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 RDH16O75452 317 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 EEDO75530 441 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 JRKO75564 520 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 PDYNP01213 254 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 SERPINE1P05121 402 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 JUNP05412 331 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ENO1P06733 434 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 FGF4P08620 206 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ATXN8OSP0DMR3 200 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 LIPCP11150 499 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 PCNAP12004 261 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 LIFP15018 202 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ALOX12P18054 663 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ALAS2P22557 587 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 GSTM2P28161 218 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 BSGP35613 385 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ARSFP54793 590 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 OLR1P78380 273 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 DCDP81605 110 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 ABHD18Q0P651 414 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 GALNT1Q10472 559 aaPredicted RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 TBL3Q12788 808 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 DDX39BQ13838 428 aaKnown RBP6.61□□□□□ -1.35
LIMD1-204ENST00000474665 RUNX2Q13950 521 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 DSG2Q14126 1118 aa6.61□□□□□ -1.35
LIMD1-204ENST00000474665 MUM1Q2TAK8 710 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms