RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NFAM1Q8NET5 270 aaPredicted RBP13.06□□□□□ -0.32
CCDC78-209ENST00000474647 ABHD11Q8NFV4 315 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 OR5M3Q8NGP4 307 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 NT5CQ8TCD5 201 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 UTP15Q8TED0 518 aaKnown RBP13.06□□□□□ -0.32
CCDC78-209ENST00000474647 NRGNQ92686 78 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 OR4K3Q96R72 315 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 HOMER3Q9NSC5 361 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 KCMF1Q9P0J7 381 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 ZFP69BQ9UJL9 534 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 ERVK-11Q9UQG0 969 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
CCDC78-209ENST00000474647 IGKV3D-11A0A0A0MRZ8 115 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 URADA6NGE7 173 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 FAM166BA8MTA8 275 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TUBB4AP04350 444 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 NR0B1P51843 470 aaKnown RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 CDKN2DP55273 166 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TIAL1Q01085 375 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 PLGLB1Q02325 96 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TFF3Q07654 80 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 PMPCAQ10713 525 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TOR1AIP1Q5JTV8 583 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 DUPD1Q68J44 220 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TTC27Q6P3X3 843 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 DMRTC2Q8IXT2 367 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 AGGF1Q8N302 714 aaeCLIP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 ZFP62Q8NB50 900 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 APCDD1LQ8NCL9 501 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 OR4K1Q8NGD4 311 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 LILRB4Q8NHJ6 448 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 C16orf52Q8NHV5 167 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 SLC5A11Q8WWX8 675 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 SREK1Q8WXA9 508 aaKnown RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 NEIL2Q969S2 332 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 CCDC77Q9BR77 488 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 SARGQ9BW04 601 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TIMMDC1Q9NPL8 285 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 PNO1Q9NRX1 252 aaKnown RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 TNFRSF10DQ9UBN6 386 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 DYRK1BQ9Y463 629 aa13.05□□□□□ -0.32
CCDC78-209ENST00000474647 PRRC2AP48634 2157 aaKnown RBP13.05□□□□□ -0.32
CCDC78-209ENST00000474647 CTAGE15A4D2H0 777 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 NPIPA2E9PIF3 369 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 NPIPA3F8WFD2 350 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 TOXO94900 526 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 ZWINTO95229 277 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 SCTRP47872 440 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 SSR4P51571 173 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 AP1S2P56377 157 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 NUP107P57740 925 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 ETF1P62495 437 aaKnown RBP13.04□□□□□ -0.32
CCDC78-209ENST00000474647 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
CCDC78-209ENST00000474647 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 PAOXQ6QHF9 649 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 STRA8Q7Z7C7 330 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 TMPRSS11BQ86T26 416 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 CTAGE6Q86UF2 777 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 CA13Q8N1Q1 262 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 ANKRD53Q8N9V6 530 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 C2CD4AQ8NCU7 369 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-209ENST00000474647 MCUQ8NE86 351 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 OR10Q1Q8NGQ4 319 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 NCLNQ969V3 563 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 VMP1Q96GC9 406 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 POM121Q96HA1 1249 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-209ENST00000474647 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 LIN28AQ9H9Z2 209 aaKnown RBP13.04□□□□□ -0.32
CCDC78-209ENST00000474647 ZFATQ9P243 1243 aa13.04□□□□□ -0.32
CCDC78-209ENST00000474647 EXPH5Q8NEV8 1989 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 VPS13CQ709C8 3753 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 A0A0G2JN53 185 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 A8MVJ9 347 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 C4orf51C9J302 202 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 ACOT7O00154 380 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 SAT1P21673 171 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 PPP2R1BP30154 601 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 DNAJA1P31689 397 aaKnown RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 AHRP35869 848 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 PGGT1BP53609 377 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 IL2P60568 153 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 PPIAP62937 165 aaKnown RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 REEP5Q00765 189 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 SLC13A2Q13183 592 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 CRYMQ14894 314 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 KRTAP21-3Q3LHN1 58 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 HECTD2Q5U5R9 776 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 C16orf47Q6ZP98 133 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-209ENST00000474647 ACAD11Q709F0 780 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 ARMC10Q8N2F6 343 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 GPATCH11Q8N954 259 aa13.03□□□□□ -0.32
CCDC78-209ENST00000474647 PSD4Q8NDX1 1056 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms