RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 KCNK13Q9HB14 408 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 DNAJC11Q9NVH1 559 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 STMN3Q9NZ72 180 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 PSMC3IPQ9P2W1 217 aaPredicted RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 TBK1Q9UHD2 729 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ANGPTL3Q9Y5C1 460 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ICE1Q9Y2F5 2266 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 LOC102723996A0A087X1L8 192 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 IGHV3-20A0A0C4DH32 117 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 OR5H15A6NDH6 313 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 URADA6NGE7 173 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 SMIM23A6NLE4 172 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 PSMD12O00232 456 aaPredicted RBP14.26□□□□□ -0.13
VARS-223ENST00000474643 WDPCPO95876 746 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 SOX11P35716 441 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 SLC6A12P48065 614 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 TAS2R50P59544 299 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 ABRAXAS2Q15018 415 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 NSDHLQ15738 373 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 EXT1Q16394 746 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 TSNAXIP1Q2TAA8 658 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 NIPAL1Q6NVV3 410 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 RPUSD3Q6P087 351 aaKnown RBP14.26□□□□□ -0.13
VARS-223ENST00000474643 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 TMEM205Q6UW68 189 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 NXPE4Q6UWF7 544 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 GFRALQ6UXV0 394 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 MFSD9Q8NBP5 474 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 PDPRQ8NCN5 879 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 ABHD11Q8NFV4 315 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 RHEBL1Q8TAI7 183 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 HAS2Q92819 552 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 ZNF354BQ96LW1 612 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 ATOH8Q96SQ7 321 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 TMEM79Q9BSE2 394 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 CPSF2Q9P2I0 782 aaKnown RBP14.26□□□□□ -0.13
VARS-223ENST00000474643 DOCK10Q96BY6 2186 aa14.26□□□□□ -0.13
VARS-223ENST00000474643 A0A1B0GUH1 482 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 A0A1W2PQ72 361 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 TRBC2A0A5B9 178 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 TAPBPO15533 448 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 PRAMEF2O60811 474 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 RBP1P09455 135 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 IL10P22301 178 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 KCNC1P48547 511 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 OC90Q02509 493 aaPredicted RBP14.25□□□□□ -0.13
VARS-223ENST00000474643 RBPJQ06330 500 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 PWP1Q13610 501 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 PDK4Q16654 411 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 DEFB134Q4QY38 66 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 LRRC70Q7Z2Q7 622 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 ANKRD37Q7Z713 158 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 KRT78Q8N1N4 520 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 RIBC1Q8N443 379 aaPredicted RBP14.25□□□□□ -0.13
VARS-223ENST00000474643 SLC5A8Q8N695 610 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 PSMF1Q92530 271 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 LPAR4Q99677 370 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 BARD1Q99728 777 aaKnown RBP14.25□□□□□ -0.13
VARS-223ENST00000474643 CD244Q9BZW8 370 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 OPTCQ9UBM4 332 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 SUCOQ9UBS9 1254 aaKnown RBP14.25□□□□□ -0.13
VARS-223ENST00000474643 PTBP2Q9UKA9 531 aaKnown RBP14.25□□□□□ -0.13
VARS-223ENST00000474643 SLC22A7Q9Y694 548 aa14.25□□□□□ -0.13
VARS-223ENST00000474643 CCDC189A1A4V9 331 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 E2F3O00716 465 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 LCMT2O60294 686 aaKnown RBP14.24□□□□□ -0.13
VARS-223ENST00000474643 SMIM24O75264 130 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 MLYCDO95822 493 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 C1GALT1C1LP0DN25 315 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 COL6A2P12110 1019 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 ALOX12P18054 663 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 COL8A1P27658 744 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 GCAP28676 217 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 GGT5P36269 586 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 SLCO1A2P46721 670 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 CASP6P55212 293 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 OR4D2P58180 307 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 REEP5Q00765 189 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 PFKFB4Q16877 469 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 SFT2D3Q587I9 215 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 XKR6Q5GH73 641 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 C1QL3Q5VWW1 255 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 PLAG1Q6DJT9 500 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 PAPD4Q6PIY7 484 aaKnown RBP14.24□□□□□ -0.13
VARS-223ENST00000474643 LRIG3Q6UXM1 1119 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 FJX1Q86VR8 437 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 KLHDC8AQ8IYD2 350 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 CYP4X1Q8N118 509 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 PLD6Q8N2A8 252 aaKnown RBP14.24□□□□□ -0.13
VARS-223ENST00000474643 ARHGEF39Q8N4T4 335 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 HORMAD2Q8N7B1 307 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 ZNF740Q8NDX6 193 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 ARMC2Q8NEN0 867 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 OR4K1Q8NGD4 311 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 CCT6BQ92526 530 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 NR4A3Q92570 626 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 ISL2Q96A47 359 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 TBC1D20Q96BZ9 403 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 OR1F2PQ96R84 312 aa14.24□□□□□ -0.13
VARS-223ENST00000474643 SLX1AQ9BQ83 275 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms