RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FAM209AQ5JX71 171 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 STEAP3Q658P3 488 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 RAVER1Q8IY67 606 aaKnown RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF740Q8NDX6 193 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF480Q8WV37 535 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 HPS1Q92902 700 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 TCEAL4Q96EI5 215 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 TCF25Q9BQ70 676 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 CEP44Q9C0F1 390 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 OR51B5Q9H339 312 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 ABCB10Q9NRK6 738 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 C1GALT1Q9NS00 363 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 KLHL3Q9UH77 587 aa10.49□□□□□ -0.73
C9orf3-214ENST00000473778 CAB39Q9Y376 341 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 CFAP20Q9Y6A4 193 aaKnown RBP10.49□□□□□ -0.73
C9orf3-214ENST00000473778 MGAT4DA6NG13 374 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 GRM6O15303 877 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TBX1O43435 398 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 MRPS14O60783 128 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TGFB1P01137 390 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 DNTTP04053 509 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 DBTP11182 482 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TIMP2P16035 220 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SPNP16150 400 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 NPPBP16860 134 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 MAGP20916 626 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 CLK1P49759 484 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SEPHS1P49903 392 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TBPL1P62380 186 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SPIBQ01892 262 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TP53BP2Q13625 1128 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 E2F2Q14209 437 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF404Q494X3 552 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF658BQ4V348 819 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ZDHHC20Q5W0Z9 365 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SLC46A3Q7Z3Q1 461 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 COMMD6Q7Z4G1 85 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 LGI4Q8N135 537 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF675Q8TD23 568 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 BTN2A2Q8WVV5 523 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 HTRA1Q92743 480 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TMEM159Q96B96 161 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 FAM83CQ9BQN1 747 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SLC35A5Q9BS91 424 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 CCM2Q9BSQ5 444 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SORBS1Q9BX66 1292 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 C6orf62Q9GZU0 229 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 PLCXD1Q9NUJ7 323 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 RHCGQ9UBD6 479 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SLC25A13Q9UJS0 675 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TRAV19A0A0A6YYK7 116 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 LOC100506127A0A0U1RQW1 187 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ANKRD34BA5PLL1 514 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 A8MU76 341 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 KPNA5O15131 536 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SEMA7AO75326 666 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 UPK1BO75841 260 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 KCNK2O95069 426 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 FURINP09958 794 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 GTF2E2P29084 291 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 VIPR1P32241 457 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 OPRD1P41143 372 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 CTSKP43235 329 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF33BQ06732 778 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 PCDH1Q08174 1060 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ELP6Q0PNE2 266 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ST3GAL4Q11206 333 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SF3B4Q15427 424 aaKnown RBP eCLIP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 MICAQ29983 383 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SYTL3Q4VX76 610 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 MLIPQ5VWP3 458 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 WDR53Q7Z5U6 358 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 DDX53Q86TM3 631 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 RNF130Q86XS8 419 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 GOT1L1Q8NHS2 421 aaPredicted RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 UTP15Q8TED0 518 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 Q96MT0 163 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 OR5M11Q96RB7 305 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SIAEQ9HAT2 523 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 ACER3Q9NUN7 267 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 SPASTQ9UBP0 616 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 MAP4K5Q9Y4K4 846 aa10.48□□□□□ -0.73
C9orf3-214ENST00000473778 TCF20Q9UGU0 1960 aaKnown RBP10.48□□□□□ -0.73
C9orf3-214ENST00000473778 AGAP5A6NIR3 686 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 WASH3PC4AMC7 463 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 K7ESM1 405 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ADAMDEC1O15204 470 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 MYO1DO94832 1006 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 HSD3B1P14060 373 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ZNF30P17039 623 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 HSD3B2P26439 372 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 ASMTP46597 345 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 LIMS1P48059 325 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 PRLHRP49683 370 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 DCDC1P59894 354 aa10.47□□□□□ -0.73
C9orf3-214ENST00000473778 TMEM115Q12893 351 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-214ENST00000473778 SELENBP1Q13228 472 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms