RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 ARMC2Q8NEN0 867 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 M1APQ8TC57 530 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ADAMTS18Q8TE60 1221 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 HAS2Q92819 552 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 SNRNP40Q96DI7 357 aaKnown RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 PTCHD1Q96NR3 888 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 GPR78Q96P69 363 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 RBCK1Q9BYM8 510 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 AICDAQ9GZX7 198 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 PRDM9Q9NQV7 894 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ADGRE2Q9UHX3 823 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 TMCO1Q9UM00 188 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ASB1Q9Y576 335 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 TNPO3Q9Y5L0 923 aaKnown RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 COPG1Q9Y678 874 aaKnown RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 UBR5O95071 2799 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 MYO18BQ8IUG5 2567 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 IGHV3-20A0A0C4DH32 117 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 B3GALT2O43825 422 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CELA2AP08217 269 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 RHOXF2BP0C7M4 288 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CD22P20273 847 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 SERPINB1P30740 379 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 MAGEA12P43365 314 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 TSFMP43897 325 aaKnown RBP16.03■□□□□ 0.16
COMMD3-210ENST00000472610 PIK3CGP48736 1102 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 ARG2P78540 354 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 PCBP2Q15366 365 aaKnown RBP eCLIP16.03■□□□□ 0.16
COMMD3-210ENST00000472610 PFKFB4Q16877 469 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 ABHD17BQ5VST6 288 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 PAPD4Q6PIY7 484 aaKnown RBP16.03■□□□□ 0.16
COMMD3-210ENST00000472610 VN1R5Q7Z5H4 357 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 LAS2Q8IYD9 372 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CNPY4Q8N129 248 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CISD2Q8N5K1 135 aaKnown RBP16.03■□□□□ 0.16
COMMD3-210ENST00000472610 TEX9Q8N6V9 391 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 DCAKDQ8WVC6 231 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CNDP1Q96KN2 507 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 SERINC2Q96SA4 455 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 RHOXF2Q9BQY4 288 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 ROGDIQ9GZN7 287 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 RNF32Q9H0A6 362 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 PCDHGA10Q9Y5H3 936 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CSAG2Q9Y5P2 127 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 CPAMD8Q8IZJ3 1885 aa16.03■□□□□ 0.16
COMMD3-210ENST00000472610 EXOC1LA0A1B0GW35 172 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 C4orf51C9J302 202 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 CLDN4O14493 209 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 SNRPAP09012 282 aaKnown RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 MYBL2P10244 700 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 PLA2G16P53816 162 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 MTTPP55157 894 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 RCN2Q14257 317 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 PRR30Q53SZ7 412 aaPredicted RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 TECRLQ5HYJ1 363 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 LIPJQ5W064 366 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 H3F3CQ6NXT2 135 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 RPUSD3Q6P087 351 aaKnown RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 ABHD17CQ6PCB6 329 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 CHSY3Q70JA7 882 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 PLD6Q8N2A8 252 aaKnown RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 UHMK1Q8TAS1 419 aaKnown RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 TSLPQ969D9 159 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 ZNF354BQ96LW1 612 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 QRFPRQ96P65 431 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 COPS7BQ9H9Q2 264 aaPredicted RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 KCNK13Q9HB14 408 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 PRM3Q9NNZ6 103 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 MMP25Q9NPA2 562 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 AGPAT4Q9NRZ5 378 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 ASF1BQ9NVP2 202 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 STMN3Q9NZ72 180 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 CPSF2Q9P2I0 782 aaKnown RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 MRPS33Q9Y291 106 aaKnown RBP16.02■□□□□ 0.16
COMMD3-210ENST00000472610 MMACHCQ9Y4U1 282 aa16.02■□□□□ 0.16
COMMD3-210ENST00000472610 SHANK1Q9Y566 2161 aa16.02■□□□□ 0.15
COMMD3-210ENST00000472610 A0A0G2JN53 185 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 SYNDIG1LA6NDD5 238 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 TRIM49D1C9J1S8 452 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 UGDHO60701 494 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 TBX6O95947 436 aaPredicted RBP16.01■□□□□ 0.15
COMMD3-210ENST00000472610 RAB38P57729 211 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 BTG2P78543 158 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 RUNX2Q13950 521 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 TMEM35AQ53FP2 167 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 GRHL2Q6ISB3 625 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 EIF1ADQ8N9N8 165 aaKnown RBP16.01■□□□□ 0.15
COMMD3-210ENST00000472610 OR7G3Q8NG95 312 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 ZNF473Q8WTR7 871 aaKnown RBP16.01■□□□□ 0.15
COMMD3-210ENST00000472610 CMTM7Q96FZ5 175 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 KCNC2Q96PR1 638 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 F2RL3Q96RI0 385 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 TBCDQ9BTW9 1192 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 MS4A8Q9BY19 250 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 TSC22D4Q9Y3Q8 395 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 PCDHGA11Q9Y5H2 935 aa16.01■□□□□ 0.15
COMMD3-210ENST00000472610 IGKV3D-11A0A0A0MRZ8 115 aa16■□□□□ 0.15
COMMD3-210ENST00000472610 TRAV17A0A0B4J275 112 aa16■□□□□ 0.15
COMMD3-210ENST00000472610 TCRBV16S1A1N1A0A5B0 115 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms