RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 A0A0G2JND7 137 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 C9orf172C9J069 976 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 C9J4A7 227 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 STMND1H3BQB6 276 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 MEN1O00255 615 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 LSM1O15116 133 aaKnown RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 ETHE1O95571 254 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 KLK1P06870 262 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 SMIM10L1P0DMW3 83 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 SPTBP11277 2137 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 FBLP22087 321 aaKnown RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 ATP5A1P25705 553 aaKnown RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 TLX1P31314 330 aaPredicted RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 ARFIP2P53365 341 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 RPL38P63173 70 aaKnown RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 RTP5Q14D33 572 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 XKR7Q5GH72 579 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 ARHGAP40Q5TG30 622 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 PRAMEF17Q5VTA0 474 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 IGF2-ASQ6U949 168 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 EPGNQ6UW88 154 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 Q6ZSR9 355 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 COMMD6Q7Z4G1 85 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 ZFAND4Q86XD8 727 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 ESX1Q8N693 406 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 ACOT4Q8N9L9 421 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 CHTF18Q8WVB6 975 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 MR1Q95460 341 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 THOC1Q96FV9 657 aaKnown RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 APIPQ96GX9 242 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 SMIM10Q96HG1 83 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 AKTIPQ9H8T0 292 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 WDR41Q9HAD4 459 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 PRDM7Q9NQW5 492 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 LYARQ9NX58 379 aaKnown RBP15.99■□□□□ 0.15
CCM2-205ENST00000472223 MS4A12Q9NXJ0 267 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 PADI1Q9ULC6 663 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 TRIM33Q9UPN9 1127 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 SCN3AQ9NY46 2000 aa15.99■□□□□ 0.15
CCM2-205ENST00000472223 GOLGA8QA0A0J9YX86 632 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 GOLGA8OA6NCC3 632 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 TRABD2BA6NFA1 517 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 SRRM3A6NNA2 597 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 NPIPB8E9PQR5 432 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 GOLGA8NF8WBI6 632 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 SGK494L7N484 410 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 RTCAO00442 366 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 PCDH7O60245 1069 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 TIAF1O95411 115 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 TBX6O95947 436 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 ANXA4P09525 319 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 ALOX15P16050 662 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 EPHA3P29320 983 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 SLC5A2P31639 672 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 GSTM5P46439 218 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 MAPK12P53778 367 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 SEC24CP53992 1094 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 OCA2Q04671 838 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 TBL3Q12788 808 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 SLAMF1Q13291 335 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 RPS6KA2Q15349 733 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 VWA5B1Q5TIE3 1220 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 NOXRED1Q6NXP6 359 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 SPATA19Q7Z5L4 167 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 ZCCHC7Q8N3Z6 543 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 METTL27Q8N6F8 245 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 ACTRT2Q8TDY3 377 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 ADAMTS18Q8TE60 1221 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 C3orf30Q96M34 536 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 ZNF578Q96N58 590 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 CCDC28BQ9BUN5 200 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 FAIM2Q9BWQ8 316 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 EPN3Q9H201 632 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 WDR55Q9H6Y2 383 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 DDX31Q9H8H2 851 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 TCF7L2Q9NQB0 619 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 NOP53Q9NZM5 478 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 KLHL14Q9P2G3 628 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 IFT80Q9P2H3 777 aaPredicted RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 PHF11Q9UIL8 331 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 MCM8Q9UJA3 840 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 KLK13Q9UKR3 277 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 MRPS33Q9Y291 106 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 MRPS2Q9Y399 296 aaKnown RBP15.98■□□□□ 0.15
CCM2-205ENST00000472223 MAU2Q9Y6X3 613 aa15.98■□□□□ 0.15
CCM2-205ENST00000472223 A0A1W2PNU3 283 aaPredicted RBP15.97■□□□□ 0.15
CCM2-205ENST00000472223 SDHDO14521 159 aa15.97■□□□□ 0.15
CCM2-205ENST00000472223 DXOO77932 396 aaKnown RBP15.97■□□□□ 0.15
CCM2-205ENST00000472223 JUNP05412 331 aaKnown RBP15.97■□□□□ 0.15
CCM2-205ENST00000472223 PRPS2P11908 318 aa15.97■□□□□ 0.15
CCM2-205ENST00000472223 DDX5P17844 614 aaKnown RBP15.97■□□□□ 0.15
CCM2-205ENST00000472223 IL10P22301 178 aa15.97■□□□□ 0.15
CCM2-205ENST00000472223 TIA1P31483 386 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCM2-205ENST00000472223 BSGP35613 385 aa15.97■□□□□ 0.15
CCM2-205ENST00000472223 BUD31P41223 144 aaPredicted RBP15.97■□□□□ 0.15
CCM2-205ENST00000472223 OR1D4P47884 311 aa15.97■□□□□ 0.15
CCM2-205ENST00000472223 IDH3AP50213 366 aa15.97■□□□□ 0.15
CCM2-205ENST00000472223 TRA2BP62995 288 aaKnown RBP15.97■□□□□ 0.15
CCM2-205ENST00000472223 ERVK-8P63133 956 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms