RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ACTR8Q9H981 624 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 PRM3Q9NNZ6 103 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 PRDM7Q9NQW5 492 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 RIC8BQ9NVN3 520 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 TMEM216Q9P0N5 145 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 PSMC3IPQ9P2W1 217 aaPredicted RBP8.62□□□□□ -1.03
SYN3-211ENST00000472027 TBK1Q9UHD2 729 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 TMCO1Q9UM00 188 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 ZFYVE26Q68DK2 2539 aa8.62□□□□□ -1.03
SYN3-211ENST00000472027 A0A088AWK7 358 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 A0A1W2PPM1 405 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 STX16-NPEPL1H3BU86 382 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 GOLGA8RI6L899 631 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 PSMD12O00232 456 aaPredicted RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 OR7A17O14581 309 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 STX16O14662 325 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 B3GALT2O43825 422 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 PRMT3O60678 531 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 UGDHO60701 494 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 SH3BGRLO75368 114 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 WISP1O95388 367 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 SLU7O95391 586 aaKnown RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 CELA2AP08217 269 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 ITGAMP11215 1152 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 RNH1P13489 461 aaKnown RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 ZNF10P21506 573 aaPredicted RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 PIK3CGP48736 1102 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 OR4D2P58180 307 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 ACTN3Q08043 901 aaPredicted RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 TGM3Q08188 693 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 ABRAXAS2Q15018 415 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 IGFBP7Q16270 282 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 SFT2D3Q587I9 215 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 DEPDC1Q5TB30 811 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 ISLR2Q6UXK2 745 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 QSOX2Q6ZRP7 698 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 LINC00696Q6ZRV3 163 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 RIPOR1Q6ZS17 1223 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 CHSY3Q70JA7 882 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 UBE3DQ7Z6J8 389 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 MYLK4Q86YV6 388 aaPredicted RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 CNPY4Q8N129 248 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 RNF175Q8N4F7 328 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 L3MBTL4Q8NA19 623 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 Q8NA96 180 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 SRFBP1Q8NEF9 429 aaKnown RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 HUS1BQ8NHY5 278 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 BRIX1Q8TDN6 353 aaKnown RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 ACMSDQ8TDX5 336 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 MZB1Q8WU39 189 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 TSLPQ969D9 159 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 ATP6V1E2Q96A05 226 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 PNPLA2Q96AD5 504 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 CMTM7Q96FZ5 175 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 PTCHD1Q96NR3 888 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 CDK15Q96Q40 435 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 LMF1Q96S06 567 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 SERINC2Q96SA4 455 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 WDR77Q9BQA1 342 aaPredicted RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 MS4A8Q9BY19 250 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 EPS8L2Q9H6S3 715 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 SLAMF7Q9NQ25 335 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 NECTIN3Q9NQS3 549 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 LUZP4Q9P127 313 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 PTGFRNQ9P2B2 879 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 ADGRE2Q9UHX3 823 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 B3GNT3Q9Y2A9 372 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 RNF11Q9Y3C5 154 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
SYN3-211ENST00000472027 TNRC6AQ8NDV7 1962 aaKnown RBP8.61□□□□□ -1.03
SYN3-211ENST00000472027 SCN3AQ9NY46 2000 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 ESPNB1AK53 854 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 H0YIV9 168 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 SAP18O00422 153 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 RTCAO00442 366 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 SORBS2O94875 1100 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 CLDN9O95484 217 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 PYGBP11216 843 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 TAC1P20366 129 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 MAOAP21397 527 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 SERPINB1P30740 379 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 PIK3CBP42338 1070 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 SLCO1A2P46721 670 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 MTTPP55157 894 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 LIM2P55344 173 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 RAB38P57729 211 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 VSNL1P62760 191 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 AP2B1P63010 937 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 FOXK1P85037 733 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 KCNC4Q03721 635 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 MFAP5Q13361 173 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 DDX39BQ13838 428 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 CPSF6Q16630 551 aaKnown RBP eCLIP8.6□□□□□ -1.03
SYN3-211ENST00000472027 BTBD16Q32M84 506 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 TMEM35AQ53FP2 167 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 CRB2Q5IJ48 1285 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 KHDRBS2Q5VWX1 349 aaKnown RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 B3GNTL1Q67FW5 361 aaPredicted RBP8.6□□□□□ -1.03
SYN3-211ENST00000472027 PLAG1Q6DJT9 500 aa8.6□□□□□ -1.03
SYN3-211ENST00000472027 PAPD4Q6PIY7 484 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms