RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SORBS1Q9BX66 1292 aaKnown RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 RNF32Q9H0A6 362 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 PCBD2Q9H0N5 130 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 GRHL1Q9NZI5 618 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 COPG2Q9UBF2 871 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 SEC14L3Q9UDX4 400 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 NPIPA1Q9UND3 350 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 HRNRQ86YZ3 2850 aaPredicted RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 VPS13CQ709C8 3753 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 A0A0G2JMM0 328 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 A0A1W2PPB8 328 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 A0A1W2PRS3 328 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 TCRBV16S1A1N1A0A5B0 115 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 LRRC14BA6NHZ5 514 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 KIR3DP1A8MWS1 328 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 G3V3Y1 287 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 RTCAO00442 366 aaKnown RBP7.55□□□□□ -1.2
USP48-207ENST00000471752 ZSCAN12O43309 604 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 RAD51CO43502 376 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 SP1P08047 785 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 C1GALT1C1LP0DN25 315 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 ICAM2P13598 275 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 POU3F2P20265 443 aaPredicted RBP7.55□□□□□ -1.2
USP48-207ENST00000471752 PTGER1P34995 402 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 CA7P43166 264 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 HSPA7P48741 367 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 AGTR2P50052 363 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 PLA2G16P53816 162 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 ARL4CP56559 192 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 MLF1P58340 268 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 ID2Q02363 134 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 SLBPQ14493 270 aaKnown RBP eCLIP7.55□□□□□ -1.2
USP48-207ENST00000471752 EFTUD2Q15029 972 aaKnown RBP eCLIP7.55□□□□□ -1.24e-11■□□□□ 9.5
USP48-207ENST00000471752 HERC3Q15034 1050 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 MAPKAPK3Q16644 382 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 SLC25A25Q6KCM7 469 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 FAM45BPQ6NSW5 357 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 ZNF793Q6ZN11 406 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 DGAT2L6Q6ZPD8 337 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 PCGF5Q86SE9 256 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 MRGPRGQ86SM5 289 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 ZNF295-AS1Q8N0V1 137 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 RPRMLQ8N4K4 120 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 APCDD1LQ8NCL9 501 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 FAM45AQ8TCE6 357 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 MS4A6EQ96DS6 147 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 VPS39Q96JC1 886 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 VPS50Q96JG6 964 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 FRMD6Q96NE9 622 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 F2RL3Q96RI0 385 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 EGFL8Q99944 293 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 UTP23Q9BRU9 249 aaKnown RBP7.55□□□□□ -1.2
USP48-207ENST00000471752 HAUS8Q9BT25 410 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 PELI2Q9HAT8 420 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 PNO1Q9NRX1 252 aaKnown RBP7.55□□□□□ -1.2
USP48-207ENST00000471752 DEPPQ9NTK1 212 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 CTNNAL1Q9UBT7 734 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 SAR1BQ9Y6B6 198 aa7.55□□□□□ -1.2
USP48-207ENST00000471752 F8P00451 2351 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 CPAMD8Q8IZJ3 1885 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 ASPDHA6ND91 283 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 LRIT2A6NDA9 550 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 HRKO00198 91 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 SAP18O00422 153 aaKnown RBP7.54□□□□□ -1.2
USP48-207ENST00000471752 CYR61O00622 381 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 ASNA1O43681 348 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 SLC19A2O60779 497 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 PDE9AO76083 593 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 MYO1DO94832 1006 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 WDR47O94967 919 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 SLC35G6P0C7Q6 338 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 CCDC166P0CW27 439 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 CD1DP15813 335 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 TCP1P17987 556 aaKnown RBP7.54□□□□□ -1.2
USP48-207ENST00000471752 CERS1P27544 350 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 HTR1EP28566 365 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 GRK3P35626 688 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 AHRP35869 848 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 AP1S2P56377 157 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 GPR85P60893 370 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 OC90Q02509 493 aaPredicted RBP7.54□□□□□ -1.2
USP48-207ENST00000471752 C2orf54Q08AI8 447 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 DOC2AQ14183 400 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 FRG1Q14331 258 aaKnown RBP7.54□□□□□ -1.2
USP48-207ENST00000471752 TGFBIQ15582 683 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 MEP1AQ16819 746 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 ZDHHC24Q6UX98 284 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 CMC1Q7Z7K0 106 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 DOLPP1Q86YN1 238 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 TICAM1Q8IUC6 712 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 SULF2Q8IWU5 870 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 SCUBE1Q8IWY4 988 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 MCEMP1Q8IX19 187 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 OR4N5Q8IXE1 308 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 KLHDC8AQ8IYD2 350 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 MARVELD2Q8N4S9 558 aa7.54□□□□□ -1.2
USP48-207ENST00000471752 FAM47BQ8NA70 645 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms